TrainSel: An R Package for Selection of Training Populations
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Author Spotlight: Impact of Intergenic Interactions on Disease-Identifying Dark Biomarkers
Published on: March 1, 2024
Deniz Akdemir1, Simon Rio2, Julio Isidro Y Sánchez2
1Agriculture & Food Science Centre, Animal and Crop Science Division, University College Dublin, Dublin, Ireland.
Abstract:
A major barrier to the wider use of supervised learning in emerging applications, such as genomic selection, is the lack of sufficient and representative labeled data to train prediction models. The amount and quality of labeled training data in many applications is usually limited and therefore careful selection of the training examples to be labeled can be useful for improving the accuracies in predictive learning tasks. In this paper, we present an R package, TrainSel, which provides flexible, efficient, and easy-to-use tools that can be used for the selection of training populations (STP). We illustrate its use, performance, and potentials in four different supervised learning applications within and outside of the plant breeding area.
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