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Assessing Cellular Target Engagement by SHP2 PTPN11 Phosphatase Inhibitors
Published on: July 17, 2020
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Phosphotyrosine couples peptide binding and SHP2 activation via a dynamic allosteric network
Michelangelo Marasco1, John Kirkpatrick1,2, Vittoria Nanna1
1Leibniz University Hannover, Center of Biomolecular Drug Research and Institute of Organic Chemistry, Schneiderberg 38, 30167 Hannover, Germany.
Computational and Structural Biotechnology Journal
|May 24, 2021
Summary
Phosphotyrosine (pY) binding to SHP2
Area of Science:
- Biochemistry
- Molecular Biology
- Structural Biology
Background:
- SHP2 is a crucial protein tyrosine phosphatase regulating cellular signaling pathways.
- Its activity is tightly controlled by phosphotyrosine (pY)-containing peptides.
- The auto-inhibited structure of SHP2 involves the N-terminal SH2 (N-SH2) domain blocking the catalytic site.
Purpose of the Study:
- To elucidate the mechanism by which pY-containing peptides activate SHP2.
- To investigate the role of allosteric communication in SHP2 regulation.
- To differentiate the regulatory roles of the N-SH2 and C-terminal SH2 (C-SH2) domains.
Main Methods:
- Structural analysis of SHP2 conformation and peptide binding.
- Investigation of protein dynamics and allosteric networks.
- Biochemical assays to assess SHP2 catalytic activity.
Main Results:
- pY recognition enhances N-SH2 loop dynamics through an allosteric network.
- This network destabilizes the N-SH2-PTP interaction, creating a binding pocket.
- Full phosphopeptide binding stabilizes the active SHP2 conformation.
Conclusions:
- An allosteric network within N-SH2 is essential for SHP2 activation.
- N-SH2 directly regulates SHP2 activity, while C-SH2 mediates phosphopeptide recruitment.
- Understanding this mechanism provides insights into SHP2-mediated signaling.
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