Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Programmable spin and transport of a living shrimp egg through photoacoustic pressure.

Optics letters·2024
Same author

Genome-Wide Association Study of Body Conformation Traits in Tashi Goats (<i>Capra hircus</i>).

Animals : an open access journal from MDPI·2024
Same author

Effects of returning paddy field to wetland on composition and stability of soil aggregates in the Yellow River Delta.

Ying yong sheng tai xue bao = The journal of applied ecology·2024
Same author

Programmable photoacoustic patterning of microparticles in air.

Nature communications·2024
Same author

Transcription-coupled DNA-protein crosslink repair by CSB and CRL4<sup>CSA</sup>-mediated degradation.

Nature cell biology·2024
Same author

LncRNA XIST modulates miR-328-3p ectopic expression in lung injury induced by tobacco-specific lung carcinogen NNK both in vitro and in vivo.

British journal of pharmacology·2024

Related Experiment Video

Updated: Nov 4, 2025

An Integrated Workflow of Identification and Quantification on FDR Control-Based Untargeted Metabolome
05:35

An Integrated Workflow of Identification and Quantification on FDR Control-Based Untargeted Metabolome

Published on: September 20, 2022

4.0K

iMAP: A Web Server for Metabolomics Data Integrative Analysis.

Di Zhou1, Wenjia Zhu1, Tao Sun2

  • 1Metabo-Profile Biotechnology (Shanghai) Co. Ltd., Shanghai, China.

Frontiers in Chemistry
|May 24, 2021
PubMed
Summary

The integrated Metabolomics Analysis Platform (iMAP) offers advanced bioinformatics tools for comprehensive metabolomics data analysis. This web-based platform provides enhanced functions, improved performance, and customizable workflows for researchers worldwide.

Keywords:
correlation-based networkmetabolomicsstatistical analysisvisualizationworkflow

More Related Videos

Untargeted Metabolomics from Biological Sources Using Ultraperformance Liquid Chromatography-High Resolution Mass Spectrometry UPLC-HRMS
11:00

Untargeted Metabolomics from Biological Sources Using Ultraperformance Liquid Chromatography-High Resolution Mass Spectrometry UPLC-HRMS

Published on: May 20, 2013

23.0K
Using the Open-Source MALDI TOF-MS IDBac Pipeline for Analysis of Microbial Protein and Specialized Metabolite Data
09:29

Using the Open-Source MALDI TOF-MS IDBac Pipeline for Analysis of Microbial Protein and Specialized Metabolite Data

Published on: May 15, 2019

19.9K

Related Experiment Videos

Last Updated: Nov 4, 2025

An Integrated Workflow of Identification and Quantification on FDR Control-Based Untargeted Metabolome
05:35

An Integrated Workflow of Identification and Quantification on FDR Control-Based Untargeted Metabolome

Published on: September 20, 2022

4.0K
Untargeted Metabolomics from Biological Sources Using Ultraperformance Liquid Chromatography-High Resolution Mass Spectrometry UPLC-HRMS
11:00

Untargeted Metabolomics from Biological Sources Using Ultraperformance Liquid Chromatography-High Resolution Mass Spectrometry UPLC-HRMS

Published on: May 20, 2013

23.0K
Using the Open-Source MALDI TOF-MS IDBac Pipeline for Analysis of Microbial Protein and Specialized Metabolite Data
09:29

Using the Open-Source MALDI TOF-MS IDBac Pipeline for Analysis of Microbial Protein and Specialized Metabolite Data

Published on: May 15, 2019

19.9K

Area of Science:

  • Bioinformatics
  • Computational Biology
  • Metabolomics

Background:

  • Metabolomics data analysis relies heavily on bioinformatics tools.
  • Existing integrated platforms for metabolomics research have limitations.
  • User demand for web-based and customizable solutions prompted further development.

Purpose of the Study:

  • To develop an advanced, web-based integrated platform for metabolomics data analysis.
  • To extend functionality, improve performance, and redesign the structure of existing tools.
  • To provide researchers with a comprehensive, user-friendly solution for metabolomics workflows.

Main Methods:

  • Development of a web-based platform, iMAP, with extended functions and improved performance.
  • Implementation of a new module for automatic pipeline construction (train-test separation, feature selection, model validation).
  • Incorporation of a new module for network construction, visualization, and analysis with editable parameters.
  • Upgraded plotting tools for customized, publication-ready figures.

Main Results:

  • iMAP offers more methods and usage modes compared to existing platforms.
  • A novel automatic pipeline module streamlines predictive model construction and validation.
  • Enhanced network analysis and visualization capabilities are provided.
  • Upgraded plotting tools facilitate the generation of highly customized figures.

Conclusions:

  • iMAP serves as a valuable alternative tool with complementary functions for metabolomics data analysis.
  • The platform addresses user demands for web-based accessibility and customized workflows.
  • iMAP enhances the capabilities of existing metabolomics data analysis platforms.