Breast cancer recurrence prediction with ensemble methods and cost-sensitive learning
Pei-Tse Yang1, Wen-Shuo Wu1, Chia-Chun Wu1
1Department of Computer Science and Information Engineering, Fu Jen Catholic University, New Taipei City, Taiwan, Republic of China.
Open Medicine (Warsaw, Poland)
|May 24, 2021
Summary
Predicting breast cancer recurrence is vital for patient survival. This study developed a model using clinical data and machine learning, achieving high sensitivity to identify patients at risk for early intervention.
Area of Science:
- Oncology
- Biostatistics
- Machine Learning
Background:
- Breast cancer is a leading cause of cancer death in women worldwide.
- While treatments improve remission rates, cancer recurrence remains a significant threat, necessitating accurate prediction for improved outcomes.
- Early prediction of breast cancer recurrence is critical for timely intervention and reducing mortality.
Purpose of the Study:
- To develop and evaluate a predictive model for breast cancer recurrence using clinical data.
- To identify key clinical features associated with breast cancer recurrence.
- To compare the performance of AdaBoost and cost-sensitive learning classifiers for recurrence prediction.
Main Methods:
- Data preprocessing and feature selection were performed on 1,061 patient records, identifying six key features.
- Resampling techniques were employed to address class imbalance in the dataset.
- Two classifiers, AdaBoost and cost-sensitive learning, were constructed and evaluated using three-fold cross-validation.
Main Results:
- The AdaBoost classifier achieved an accuracy of 0.973 and a sensitivity of 0.675.
- The combined AdaBoost and cost-sensitive learning model yielded an accuracy of 0.468 and a high sensitivity of 0.947.
- The combined model demonstrated a strong ability to minimize false dismissals, crucial for early detection.
Conclusions:
- The developed prediction model, particularly the combination of AdaBoost and cost-sensitive learning, shows promise as a decision support tool.
- This model can aid in the evaluation of follow-up visits, facilitating early intervention and advanced treatments.
- Effective prediction of breast cancer recurrence can significantly contribute to lowering cancer mortality rates.
More Related Videos
Related Concept Videos
Cancer Survival Analysis
493
Cancer survival analysis focuses on quantifying and interpreting the time from a key starting point, such as diagnosis or the initiation of treatment, to a specific endpoint, such as remission or death. This analysis provides critical insights into treatment effectiveness and factors that influence patient outcomes, helping to shape clinical decisions and guide prognostic evaluations. A cornerstone of oncology research, survival analysis tackles the challenges of skewed, non-normally...
493
Kaplan-Meier Approach
345
The Kaplan-Meier estimator is a non-parametric method used to estimate the survival function from time-to-event data. In medical research, it is frequently employed to measure the proportion of patients surviving for a certain period after treatment. This estimator is fundamental in analyzing time-to-event data, making it indispensable in clinical trials, epidemiological studies, and reliability engineering. By estimating survival probabilities, researchers can evaluate treatment effectiveness,...
345
Comparing the Survival Analysis of Two or More Groups
375
Survival analysis is a cornerstone of medical research, used to evaluate the time until an event of interest occurs, such as death, disease recurrence, or recovery. Unlike standard statistical methods, survival analysis is particularly adept at handling censored data—instances where the event has not occurred for some participants by the end of the study or remains unobserved. To address these unique challenges, specialized techniques like the Kaplan-Meier estimator, log-rank test, and...
375
Prediction Intervals
2.5K
The interval estimate of any variable is known as the prediction interval. It helps decide if a point estimate is dependable.
However, the point estimate is most likely not the exact value of the population parameter, but close to it. After calculating point estimates, we construct interval estimates, called confidence intervals or prediction intervals. This prediction interval comprises a range of values unlike the point estimate and is a better predictor of the observed sample value, y.
However, the point estimate is most likely not the exact value of the population parameter, but close to it. After calculating point estimates, we construct interval estimates, called confidence intervals or prediction intervals. This prediction interval comprises a range of values unlike the point estimate and is a better predictor of the observed sample value, y.
2.5K
Sensitivity, Specificity, and Predicted Value
897
In healthcare diagnostics, laboratory tests play a crucial role in identifying and diagnosing a wide range of medical conditions. However, interpreting test results is not always straightforward. An abnormal test result does not always confirm the presence of a disease, just as a normal result does not guarantee its absence. To assess the reliability of these diagnostic tools, healthcare practitioners rely on two key statistical indicators: sensitivity and specificity.
Sensitivity is the...
Sensitivity is the...
897


