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Updated: Nov 4, 2025

Testing Targeted Therapies in Cancer using Structural DNA Alteration Analysis and Patient-Derived Xenografts
Published on: July 25, 2020
Targeting IDH1/2 mutant cancers with combinations of ATR and PARP inhibitors
Amrita Sule1, Jinny Van Doorn1, Ranjini K Sundaram1
1Department of Therapeutic Radiology, Yale University School of Medicine, New Haven, CT 06511, USA.
Abstract:
Mutations in the isocitrate dehydrogenase-1 and -2 (IDH1/2) genes were first identified in glioma and acute myeloid leukemia (AML), and subsequently found in multiple other tumor types. These neomorphic mutations convert the normal product of enzyme, α-ketoglutarate (αKG), to the oncometabolite 2-hydroxyglutarate (2HG). Our group recently demonstrated that 2HG suppresses the high-fidelity homologous recombination (HR) DNA repair pathway, resulting in a state referred to as 'BRCAness', which confers exquisite sensitivity to poly(ADP-ribose) polymerase (PARP) inhibitors. In this study, we sought to elucidate sensitivity of IDH1/2-mutant cells to DNA damage response (DDR) inhibitors and, whether combination therapies could enhance described synthetic lethal interactions. Here, we report that ATR (ataxia telangiectasia and Rad3-related protein kinase) inhibitors are active against IDH1/2-mutant cells, and that this activity is further potentiated in combination with PARP inhibitors. We demonstrate this interaction across multiple cell line models with engineered and endogenous IDH1/2 mutations, with robust anti-tumor activity in vitro and in vivo. Mechanistically, we found ATR and PARP inhibitor treatment induces premature mitotic entry, which is significantly elevated in the setting of IDH1/2-mutations. These data highlight the potential efficacy of targeting HR defects in IDH1/2-mutant cancers and support the development of this combination in future clinical trials.
Insights
Isocitrate dehydrogenase (IDH1/2) mutations create a DNA repair defect, making IDH1/2-mutant cancers sensitive to PARP inhibitors. Combining ATR and PARP inhibitors shows potent anti-tumor activity in IDH1/2-mutant cells.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Genetics
Background:
- Isocitrate dehydrogenase (IDH1/2) mutations are found in glioma, AML, and other cancers.
- IDH1/2 mutations produce 2-hydroxyglutarate (2HG), which impairs DNA repair and causes BRCAness.
- BRCAness confers sensitivity to poly(ADP-ribose) polymerase (PARP) inhibitors.
Purpose of the Study:
- To investigate the sensitivity of IDH1/2-mutant cells to DNA damage response (DDR) inhibitors.
- To determine if combination therapies can enhance synthetic lethal interactions in IDH1/2-mutant cancers.
Main Methods:
- Utilized cell line models with engineered and endogenous IDH1/2 mutations.
- Tested ataxia telangiectasia and Rad3-related protein kinase (ATR) inhibitors alone and in combination with PARP inhibitors.
- Evaluated anti-tumor activity in vitro and in vivo.
Main Results:
- ATR inhibitors demonstrated activity against IDH1/2-mutant cells.
- The combination of ATR and PARP inhibitors showed potentiated anti-tumor activity.
- ATR and PARP inhibition induced premature mitotic entry, elevated in IDH1/2-mutant cells.
Conclusions:
- ATR inhibitors are effective against IDH1/2-mutant cancers.
- Combination therapy with ATR and PARP inhibitors offers a promising strategy for treating IDH1/2-mutant tumors.
- Targeting homologous recombination defects in IDH1/2-mutant cancers warrants further clinical investigation.
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