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Updated: Nov 4, 2025

Development of a Polymicrobial Colony Biofilm Model to Test Antimicrobials in Cystic Fibrosis
Published on: September 20, 2024
The Crohn's disease-related bacterial strain LF82 assembles biofilm-like communities to protect itself from
Victoria Prudent1, Gaëlle Demarre1, Emilie Vazeille2
1CIRB - Collège de France, CNRS-UMR7241, INSERM U1050, PSL Research University, Paris, France.
Abstract:
Patients with Crohn's disease exhibit abnormal colonization of the intestine by adherent invasive E. coli (AIEC). They adhere to epithelial cells, colonize them and survive inside macrophages. It appeared recently that AIEC LF82 adaptation to phagolysosomal stress involves a long lag phase in which many LF82 cells become antibiotic tolerant. Later during infection, they proliferate in vacuoles and form colonies harboring dozens of LF82 bacteria. In the present work, we investigated the mechanism sustaining this phase of growth. We found that intracellular LF82 produced an extrabacterial matrix that acts as a biofilm and controls the formation of LF82 intracellular bacterial communities (IBCs) for several days post infection. We revealed the crucial role played by the pathogenicity island encoding the yersiniabactin iron capture system to form IBCs and for optimal LF82 survival. These results illustrate that AIECs use original strategies to establish their replicative niche within macrophages.
Insights
Adherent invasive E. coli (AIEC) in Crohn's disease form intracellular bacterial communities (IBCs) within macrophages. These AIEC utilize an extrabacterial biofilm matrix and yersiniabactin iron system for survival and replication.
Area of Science:
- Microbiology
- Immunology
- Gastroenterology
Background:
- Crohn's disease patients show abnormal intestinal colonization by adherent invasive E. coli (AIEC).
- AIEC adhere to and invade epithelial cells, surviving within macrophages.
- AIEC LF82 exhibits antibiotic tolerance and intracellular proliferation within vacuoles.
Purpose of the Study:
- To investigate the growth mechanism of AIEC within macrophages.
- To identify factors contributing to intracellular bacterial community (IBC) formation.
Main Methods:
- Intracellular survival assays of AIEC LF82 within macrophages.
- Analysis of bacterial matrix production and biofilm formation.
- Investigation of the role of the yersiniabactin iron system.
Main Results:
- Intracellular AIEC LF82 produces an extrabacterial matrix, forming a biofilm that sustains IBCs.
- The pathogenicity island encoding the yersiniabactin iron capture system is crucial for IBC formation.
- Optimal AIEC LF82 survival is dependent on the yersiniabactin system.
Conclusions:
- AIEC employ unique strategies to establish replicative niches within host macrophages.
- Biofilm formation and iron acquisition are key to AIEC persistence in Crohn's disease.
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