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Updated: Nov 3, 2025

Biosensor for Detection of Antibiotic Resistant Staphylococcus Bacteria
Published on: May 8, 2013
Mutation-Based Antibiotic Resistance Mechanism in Methicillin-Resistant Staphylococcus aureus Clinical Isolates
Tanveer Ali1, Abdul Basit1, Asad Mustafa Karim2
1Institute of Microbiology and Molecular Genetics, University of the Punjab, Lahore 54590, Pakistan.
Abstract:
β-Lactam antibiotics target penicillin-binding proteins and inhibit the synthesis of peptidoglycan, a crucial step in cell wall biosynthesis. Staphylococcus aureus acquires resistance against β-lactam antibiotics by producing a penicillin-binding protein 2a (PBP2a), encoded by the mecA gene. PBP2a participates in peptidoglycan biosynthesis and exhibits a poor affinity towards β-lactam antibiotics. The current study was performed to determine the diversity and the role of missense mutations of PBP2a in the antibiotic resistance mechanism. The methicillin-resistant Staphylococcus aureus (MRSA) isolates from clinical samples were identified using phenotypic and genotypic techniques. The highest frequency (60%, 18 out of 30) of MRSA was observed in wound specimens. Sequence variation analysis of the mecA gene showed four amino acid substitutions (i.e., E239K, E239R, G246E, and E447K). The E239R mutation was found to be novel. The protein-ligand docking results showed that the E239R mutation in the allosteric site of PBP2a induces conformational changes in the active site and, thus, hinders its interaction with cefoxitin. Therefore, the present report indicates that mutation in the allosteric site of PBP2a provides a more closed active site conformation than wide-type PBP2a and then causes the high-level resistance to cefoxitin.
Insights
New mutations in the penicillin-binding protein 2a (PBP2a) of methicillin-resistant Staphylococcus aureus (MRSA) can cause high-level resistance to cefoxitin. These PBP2a mutations alter the protein
Area of Science:
- Microbiology
- Molecular Biology
- Drug Resistance
Background:
- β-Lactam antibiotics are essential for treating bacterial infections by inhibiting peptidoglycan synthesis.
- Staphylococcus aureus develops resistance through penicillin-binding protein 2a (PBP2a), encoded by mecA, which has low affinity for these antibiotics.
Purpose of the Study:
- To investigate the diversity and functional role of missense mutations in PBP2a contributing to antibiotic resistance.
- To analyze sequence variations in the mecA gene of clinical MRSA isolates.
Main Methods:
- Phenotypic and genotypic identification of methicillin-resistant Staphylococcus aureus (MRSA) from clinical samples.
- Sequence variation analysis of the mecA gene.
- Protein-ligand docking to assess the impact of mutations on PBP2a-cefoxitin interaction.
Main Results:
- MRSA was most frequent in wound specimens (60%).
- Four amino acid substitutions in PBP2a were identified: E239K, E239R, G246E, and E447K.
- A novel E239R mutation in the allosteric site altered PBP2a's active site conformation, hindering cefoxitin binding and conferring high-level resistance.
Conclusions:
- Missense mutations in PBP2a, particularly E239R, significantly contribute to cefoxitin resistance in MRSA.
- Allosteric site mutations can induce conformational changes, leading to reduced antibiotic susceptibility.
- Understanding these mutations is crucial for developing strategies against MRSA infections.
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