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Assays for Validating Histone Acetyltransferase Inhibitors
Published on: August 6, 2020
TET2 Inhibits PD-L1 Gene Expression in Breast Cancer Cells through Histone Deacetylation
Yinghui Shen1, Lu Liu1, Mengyuan Wang1
1Center for Medical Research and Innovation, Shanghai Pudong Hospital, Fudan University Pudong Medical Center, and Shanghai Key Laboratory of Medical Epigenetics, Institutes of Biomedical Sciences, Fudan University, Shanghai 200032, China.
Abstract:
Activation of PD-1/PD-L1 checkpoint is a critical step for the immune evasion of malignant tumors including breast cancer. However, the epigenetic mechanism underlying the aberrant expression of PD-L1 in breast cancer cells remains poorly understood. To investigate the role of TET2 in the regulation of PD-L1 gene expression, quantitative reverse transcription PCR (RT-qPCR), Western blotting, chromatin immunoprecipitation (ChIP) assay and MeDIP/hMeDIP-qPCR were performed on MCF7 and MDA-MB-231 human breast cancer cells. Here, we reported that TET2 depletion upregulated PD-L1 gene expression in MCF7 cells. Conversely, ectopic expression of TET2 inhibited PD-L1 gene expression in MDA-MB-231 cells. Mechanistically, TET2 protein recruits histone deacetylases (HDACs) to PD-L1 gene promoter and orchestrates a repressive chromatin structure to suppress PD-L1 gene transcription, which is likely independent of DNA demethylation. Consistently, treatment with HDAC inhibitors upregulated PD-L1 gene expression in wild-type (WT) but not TET2 KO MCF7 cells. Furthermore, analysis of the CCLE and TCGA data showed a negative correlation between TET2 and PD-L1 expression in breast cancer. Taken together, our results identify a new epigenetic regulatory mechanism of PD-L1 gene transcription, linking the catalytic activity-independent role of TET2 to the anti-tumor immunity in breast cancer.
Insights
TET2 epigenetic regulation suppresses PD-L1 expression in breast cancer. TET2 recruits HDACs to the PD-L1 promoter, reducing immune evasion and enhancing anti-tumor immunity.
Area of Science:
- Epigenetics
- Cancer Biology
- Immunology
Background:
- Programmed cell death protein 1 (PD-1)/PD-L1 pathway is crucial for tumor immune evasion.
- Aberrant PD-L1 expression in breast cancer is linked to poor prognosis.
- Epigenetic mechanisms regulating PD-L1 in breast cancer are not fully understood.
Purpose of the Study:
- To investigate the role of TET2 in regulating PD-L1 gene expression in breast cancer.
- To elucidate the epigenetic mechanism by which TET2 influences PD-L1 transcription.
Main Methods:
- Quantitative reverse transcription PCR (RT-qPCR) and Western blotting.
- Chromatin immunoprecipitation (ChIP) assay and methylation-based DNA immunoprecipitation (MeDIP/hMeDIP)-qPCR.
- Analysis of CCLE and TCGA datasets for gene expression correlation.
Main Results:
- TET2 depletion increased PD-L1 expression in MCF7 cells; TET2 overexpression decreased it in MDA-MB-231 cells.
- TET2 recruits histone deacetylases (HDACs) to the PD-L1 promoter, forming repressive chromatin.
- HDAC inhibition upregulated PD-L1 in WT but not TET2-deficient cells, suggesting a catalytic activity-independent role for TET2.
- A negative correlation between TET2 and PD-L1 expression was observed in breast cancer data.
Conclusions:
- TET2 functions as a transcriptional repressor of PD-L1 in breast cancer.
- This regulation occurs via recruitment of HDACs, independent of DNA demethylation.
- Identifies a novel epigenetic mechanism linking TET2 to anti-tumor immunity in breast cancer.
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