Predicting Treatment Outcomes Using Explainable Machine Learning in Children with Asthma
Mario Lovrić1, Ivana Banić2, Emanuel Lacić1
1Knowledge Discovery, Know-Center, Infeldgasse 13, 8010 Graz, Austria.
Insights
Machine learning accurately predicts pediatric asthma treatment success, particularly for symptom control and fractional exhaled nitric oxide (FENO) levels. Key predictors include asthma severity and immunoglobulin E (IgE), aiding precision medicine approaches.
Area of Science:
- Pediatric Pulmonology
- Computational Biology
- Immunology
Background:
- Childhood asthma is a complex, heterogeneous disease with variable treatment responses.
- Current anti-inflammatory treatments are inadequate for a significant number of pediatric asthma patients.
- Understanding predictors of treatment success is crucial for optimizing management strategies.
Purpose of the Study:
- To employ machine learning algorithms for predicting treatment success in pediatric asthma.
- To identify key variables influencing treatment outcomes for improved mechanistic understanding.
- To evaluate prediction accuracy based on asthma control, lung function (FEV1, MEF50), and fractional exhaled nitric oxide (FENO).
Main Methods:
- Utilized Random Forest and AdaBoost classifiers on a cohort of 365 children with mild to severe asthma.
- Assessed treatment outcomes after 6 months of controller medication based on changes in asthma control, FEV1, MEF50, and FENO.
- Identified predictive variables associated with treatment response.
Main Results:
- Machine learning models achieved higher prediction power for asthma control and FENO-based outcomes, especially in younger children.
- Asthma severity and total IgE were significant predictors for both asthma control and FENO outcomes.
- MEF50-based outcomes were better predicted than FEV1-based responses, with hsCRP highlighting distal airway involvement.
Conclusions:
- Machine learning offers a robust tool for predicting treatment success in pediatric asthma, outperforming traditional lung function metrics.
- Asthma control and FENO-guided management, complemented by machine learning predictions, support precision medicine in pediatric asthma.
- T2-high asthma phenotype appears to respond best to anti-inflammatory therapies, warranting further investigation.
Abstract:
Asthma in children is a heterogeneous disease manifested by various phenotypes and endotypes. The level of disease control, as well as the effectiveness of anti-inflammatory treatment, is variable and inadequate in a significant portion of patients. By applying machine learning algorithms, we aimed to predict the treatment success in a pediatric asthma cohort and to identify the key variables for understanding the underlying mechanisms. We predicted the treatment outcomes in children with mild to severe asthma (N = 365), according to changes in asthma control, lung function (FEV1 and MEF50) and FENO values after 6 months of controller medication use, using Random Forest and AdaBoost classifiers. The highest prediction power is achieved for control- and, to a lower extent, for FENO-related treatment outcomes, especially in younger children. The most predictive variables for asthma control are related to asthma severity and the total IgE, which were also predictive for FENO-based outcomes. MEF50-related treatment outcomes were better predicted than the FEV1-based response, and one of the best predictive variables for this response was hsCRP, emphasizing the involvement of the distal airways in childhood asthma. Our results suggest that asthma control- and FENO-based outcomes can be more accurately predicted using machine learning than the outcomes according to FEV1 and MEF50. This supports the symptom control-based asthma management approach and its complementary FENO-guided tool in children. T2-high asthma seemed to respond best to the anti-inflammatory treatment. The results of this study in predicting the treatment success will help to enable treatment optimization and to implement the concept of precision medicine in pediatric asthma treatment.
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