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Updated: Nov 3, 2025

Isolation and Functional Analysis of Mitochondria from Cultured Cells and Mouse Tissue
Published on: March 23, 2015
Isolation and Electron Microscopic Analysis of Liver Cancer Cell Mitochondria
Yaschar Kabiri1, Carola Eberhagen2, Sabine Schmitt1
1Institute of Toxicology and Environmental Hygiene, School of Medicine, Technical University of Munich, Munich, Germany.
Abstract:
Isolation of mitochondria is a crucial method for examining molecular details of this organelle's manifold functions. Historically, mitochondrial isolations required large amounts of sample material which impeded their isolation from cultured cells. We have therefore developed a method allowing for controlled and reproducible isolation of intact and functional mitochondria from diverse cell types in culture. Here we provide a methodological update of this approach together with a protocol for the subsequent analysis of such isolated mitochondria by electron microscopy. Combining the isolation procedure with this powerful imaging method can reveal ultrastructural mitochondrial peculiarities in disease settings that might not be evident in intact cells and allows for assessment of mitochondrial membrane integrity and sample purity.
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