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MicroRNA In situ Hybridization for Formalin Fixed Kidney Tissues
Published on: November 30, 2013
Metformin mediates MicroRNA-21 regulated circulating matrix metalloproteinase-9 in diabetic nephropathy: an in-silico
Manoj Khokhar1, Dipayan Roy1, Nitin Kumar Bajpai2
1Department of Biochemistry, All India Institute of Medical Sciences, Jodhpur, 342005, India.
Abstract:
Metformin is commonly used as an oral hypoglycaemic agent in type 2 diabetes mellitus (T2DM). MicroRNA-21 is widely studied in diabetic and diabetic nephropathy (DN) patients. Matrix metalloproteinase-9 (MMP9) is involved in extracellular matrix degradation and tissue repair processes. However, the effect of metformin administration on hsa-miR-21-5p and MMP9 has not been evaluated in T2DM and DN patients. The study subjects were divided into three groups (Healthy controls = 36, T2DM = 38, DN = 35). Anthropometric measurements were taken and biochemical tests were carried out on fasting blood samples. Reverse transcriptase PCR was employed for whole blood gene expression analysis of hsa-miR-21-5p and MMP9. Bioinformatics analyses including drug-gene interaction, protein-protein interaction, functional enrichment analyses and co-expression networks were performed. In the present study, MMP9 and hsa-miR-21-5p levels were downregulated and upregulated respectively in T2DM and DN patients when compared with healthy controls. However, in metformin-treated group, a downregulation of hsa-miR-21-5p and upregulation of MMP9 was observed. In-silico analysis revealed the target genes involved in the miR-21 and MMP9 interaction network. Metformin directly targets miR-21 and regulates MMP9 expression in T2DM patients, influencing the pathogenesis of DN.HighlightsMMP-9 and hsa-miR-21-5p were downregulated and upregulated respectively in T2DM and DN patients in a Western Indian population.The patients treated with metformin showed downregulation of hsa-miR-21-5p and upregulation of MMP9.In-silico analysis revealed MMP-9 as well as PTEN to be targets of hsa-miR-21-5p.Metformin regulates MMP9 expression in T2DM and DN patient populations through hsa-miR-21-5p.
Insights
Metformin influences microRNA-21 (miR-21) and matrix metalloproteinase-9 (MMP9) in type 2 diabetes mellitus (T2DM) and diabetic nephropathy (DN). This study shows metformin alters miR-21 and MMP9 levels, impacting DN pathogenesis.
Area of Science:
- Endocrinology and Metabolism
- Molecular Biology
- Genetics
Background:
- Type 2 diabetes mellitus (T2DM) and diabetic nephropathy (DN) are significant health concerns.
- MicroRNA-21 (miR-21) and matrix metalloproteinase-9 (MMP9) are implicated in diabetes and its complications.
- The impact of metformin on miR-21 and MMP9 in T2DM and DN remains unclear.
Purpose of the Study:
- To investigate the effect of metformin on hsa-miR-21-5p and MMP9 expression in T2DM and DN patients.
- To explore the potential regulatory role of metformin in the pathogenesis of DN.
- To elucidate the interaction network between miR-21 and MMP9 using bioinformatics.
Main Methods:
- Cross-sectional study involving healthy controls, T2DM patients, and DN patients.
- Measurement of anthropometric and biochemical parameters.
- Gene expression analysis of hsa-miR-21-5p and MMP9 using reverse transcriptase PCR.
- In-silico bioinformatics analyses (drug-gene interaction, PPI, functional enrichment, co-expression networks).
Main Results:
- MMP9 was downregulated, while hsa-miR-21-5p was upregulated in T2DM and DN patients compared to controls.
- Metformin treatment led to decreased hsa-miR-21-5p and increased MMP9 levels.
- Bioinformatics analysis identified PTEN as a target of hsa-miR-21-5p and suggested a miR-21/MMP9 interaction network.
Conclusions:
- Metformin directly targets hsa-miR-21-5p, consequently regulating MMP9 expression in T2DM and DN.
- These molecular changes induced by metformin may influence the pathogenesis of diabetic nephropathy.
- The findings highlight a novel mechanism of metformin action in managing T2DM and its renal complications.
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