Isolation of Mouse Megakaryocyte Progenitors
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Updated: Nov 2, 2025

Isolation of Mouse Megakaryocyte Progenitors
Published on: May 20, 2021
Quentin Kimmerlin1, Manuela Tavian2, Christian Gachet1
1Université de Strasbourg, INSERM UMR S1255, EFS Grand-EST.
Abstract:
Bone marrow megakaryocytes are large polyploid cells that ensure the production of blood platelets. They arise from hematopoietic stem cells through megakaryopoiesis. The final stages of this process are complex and classically involve the bipotent Megakaryocyte-Erythrocyte Progenitors (MEP) and the unipotent Megakaryocyte Progenitors (MKp). These populations precede the formation of bona fide megakaryocytes and, as such, their isolation and characterization could allow for the robust and unbiased analysis of megakaryocyte formation. This protocol presents in detail the procedure to collect hematopoietic cells from mouse bone marrow, the enrichment of hematopoietic progenitors through magnetic depletion and finally a cell sorting strategy that yield highly purified MEP and MKp populations. First, bone marrow cells are collected from the femur, the tibia, and also the iliac crest, a bone that contains a high number of hematopoietic progenitors. The use of iliac crest bones drastically increases the total cell number obtained per mouse and thus contributes to a more ethical use of animals. A magnetic lineage depletion was optimized using 450 nm magnetic beads allowing a very efficient cell sorting by flow cytometry. Finally, the protocol presents the labeling and gating strategy for the sorting of the two highly purified megakaryocyte progenitor populations: MEP (Lin-Sca-1-c-Kit+CD16/32-CD150+CD9dim) and MKp (Lin- Sca-1-c-Kit+CD16/32-CD150+CD9bright). This technique is easy to implement and provides enough cellular material to perform i) molecular characterization for a deeper knowledge of their identity and biology, ii) in vitro differentiation assays, that will provide a better understanding of the mechanisms of maturation of megakaryocytes, or iii) in vitro models of interaction with their microenvironment.
Insights
This study details a protocol for isolating highly purified megakaryocyte progenitor populations, Megakaryocyte-Erythrocyte Progenitors (MEP) and Megakaryocyte Progenitors (MKp), from mouse bone marrow. This method enables deeper molecular and functional analysis of megakaryocyte development.
Area of Science:
- Hematology
- Stem Cell Biology
- Cell Biology
Background:
- Megakaryocytes are crucial for platelet production, originating from hematopoietic stem cells via megakaryopoiesis.
- The final stages of megakaryopoiesis involve Megakaryocyte-Erythrocyte Progenitors (MEP) and Megakaryocyte Progenitors (MKp).
- Isolating and characterizing these progenitors is key to understanding megakaryocyte formation.
Purpose of the Study:
- To present a detailed protocol for the isolation of highly purified MEP and MKp populations from mouse bone marrow.
- To enable robust and unbiased analysis of megakaryocyte formation and maturation.
- To provide sufficient cellular material for molecular characterization and in vitro studies.
Main Methods:
- Collection of hematopoietic cells from mouse femur, tibia, and iliac crest.
- Optimized magnetic lineage depletion using 450 nm beads for hematopoietic progenitor enrichment.
- Flow cytometry cell sorting strategy with specific gating for MEP (Lin-Sca-1-c-Kit+CD16/32-CD150+CD9dim) and MKp (Lin-Sca-1-c-Kit+CD16/32-CD150+CD9bright) populations.
Main Results:
- Successful isolation of highly purified MEP and MKp populations from mouse bone marrow.
- The protocol utilizes efficient magnetic depletion and precise flow cytometry gating.
- The use of iliac crest bone marrow increases cell yield, promoting ethical animal use.
Conclusions:
- This protocol provides a reliable method for obtaining pure MEP and MKp populations.
- The isolated progenitors can be used for molecular identity studies and in vitro differentiation assays.
- This technique advances the understanding of megakaryocyte biology and maturation mechanisms.

