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Intracellular artificial supramolecules based on de novo designed Y15 peptides
Takayuki Miki1, Taichi Nakai2, Masahiro Hashimoto2
1School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Kanagawa, Japan. tmiki@bio.titech.ac.jp.
Nature Communications
|June 8, 2021
Summary
Researchers developed a self-assembling peptide (Y15) that forms functional protein assemblies inside living cells. This peptide platform enables intracellular protein assembly, opening new avenues for biomaterials and cell biology research.
Area of Science:
- Biomaterials Science
- Molecular Biology
- Cell Biology
Background:
- De novo designed self-assembling peptides (SAPs) are advanced building blocks for supramolecular biomaterials.
- Applications include scaffolds for tissue culture and vaccine adjuvants, but intracellular use remains largely unexplored.
Purpose of the Study:
- To report a novel self-assembling peptide (Y15) capable of forming functional protein assemblies within living cells.
- To demonstrate the potential of Y15 for intracellular bottom-up synthesis of protein structures.
Main Methods:
- Y15 peptide was designed to form beta-sheet structures.
- Superfolder green fluorescent protein (sfGFP) fused to Y15 was used to visualize intracellular assembly.
- Fluorescence anisotropy and pull-down assays validated Y15 self-assembly.
- Intracellular Nck assembly reconstitution and subsequent N-WASP-mediated actin polymerization were analyzed.
Main Results:
- Y15 peptide self-assembles into beta-sheet structures within mammalian cells, forming observable fluorescent puncta when fused with sfGFP.
- The Y15 platform successfully reconstituted intracellular Nck protein assemblies.
- Artificial Nck clusters induced neural Wiskott-Aldrich syndrome protein (N-WASP)-mediated actin polymerization.
Conclusions:
- Y15 is a functional self-assembling peptide for intracellular applications.
- This platform facilitates the bottom-up synthesis of functional protein assemblies in living cells.
- The study evaluates the impact of Nck domain valency and density on actin polymerization.

