Machine Learning Classification of Inflammatory Bowel Disease in Children Based on a Large Real-World Pediatric

Nicolas Schneider1, Keywan Sohrabi2, Henning Schneider1

  • 1Institute of Medical Informatics, Justus-Liebig-University Giessen, Gießen, Germany.

Frontiers in Medicine
|June 10, 2021
PubMed

Insights

Machine learning, particularly convolutional neural networks, can accurately diagnose pediatric inflammatory bowel diseases (PIBD) using readily available clinical data, improving diagnostic speed and care.

Area of Science:

  • Computational medicine
  • Pediatric gastroenterology
  • Machine learning applications

Background:

  • Rising incidence of pediatric inflammatory bowel diseases (PIBD) necessitates improved diagnostic methods.
  • Existing machine learning models for PIBD classification often rely on complex data like histology or extensive serology.
  • There is a need for diagnostic tools utilizing promptly available clinical data for enhanced patient care.

Purpose of the Study:

  • To evaluate the performance of various machine learning algorithms for classifying PIBD using readily accessible data.
  • To assess the diagnostic accuracy of models trained on initial and follow-up patient visit data.
  • To optimize the best-performing algorithm for clinical application in PIBD diagnostics.

Main Methods:

  • Data from the CEDATA-GPGE registry, including inflammatory bowel conditions from initial and follow-up visits, were utilized.
  • Patients in remission were excluded, and categorical data were numerically encoded.
  • Support vector machine (SVM), random forest (RF), extreme gradient boosting (XGBoost), dense neural network (DNN), and convolutional neural network (CNN) models were employed and compared.

Main Results:

  • An optimized convolutional neural network (CNN) achieved up to 90.57% accuracy on data from 2018.
  • Other models showed varying performance, with DNN reaching 88.78% and XGBoost at 83.94%.
  • Prediction accuracy was higher for more recent datasets (2018) compared to older ones.

Conclusions:

  • Machine learning classification, especially using CNNs, is a viable approach for PIBD diagnostics with timely available data.
  • The study demonstrates the potential of AI in improving diagnostic latency and quality of care for PIBD.
  • Further optimization of CNNs can enhance the accuracy and clinical utility of PIBD diagnostic tools.

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