Complete Genome Sequence of Escherichia coli Antibiotic Resistance Isolate Bank Number 0346

Keira L Stuart1, Darrell O Bayles2, Sarah M Shore2

  • 1National Veterinary Services Laboratories, Animal and Plant Health Inspection Service, USDA, Ames, Iowa, USA.

Insights

The mcr-1 gene confers polymyxin resistance in bacteria, raising public health concerns. This study details the complete genome sequence of an mcr-1-carrying, colistin-resistant Escherichia coli strain.

Area of Science:

  • Microbiology
  • Genomics
  • Public Health

Background:

  • Plasmid-mediated polymyxin resistance, particularly the mcr-1 gene, poses a significant public health threat.
  • The rapid horizontal transfer of resistance genes contributes to the spread of antibiotic resistance.

Purpose of the Study:

  • To characterize the complete genome of a colistin-resistant Escherichia coli isolate harboring the mcr-1 gene.
  • To provide genomic data for understanding the dissemination of polymyxin resistance.

Main Methods:

  • Whole-genome sequencing of the Escherichia coli isolate (Antibiotic Resistance Isolate Bank number 0346).
  • Bioinformatic analysis to identify the mcr-1 gene and its plasmid context.

Main Results:

  • The complete genome sequence of the colistin-resistant Escherichia coli isolate was determined.
  • The presence of the plasmid-borne mcr-1 gene was confirmed in the isolate.

Conclusions:

  • The genomic data provides a basis for studying the epidemiology of mcr-1.
  • Understanding the genetic context of mcr-1 is crucial for combating polymyxin resistance in clinical settings.