Acquired Resistance to KRASG12C Inhibition in Cancer
Mark M Awad1, Shengwu Liu1, Igor I Rybkin1
1From Dana-Farber Cancer Institute (M.M.A., S.L., J.D., J.O.J., K.E.L., H.F., K.M.H., B.M.W., P.A.J., A.J.A.), Massachusetts General Hospital (R.S.H., Y.P.H.), and Brigham and Women's Hospital (L.M.S., A.J.A.), Boston, and Broad Institute of MIT and Harvard (S.L., X.Y., N.S.P., D.E.R., K.M.H., A.J.A.) and Foundation Medicine (J.L., A.B.S.), Cambridge - all in Massachusetts; Henry Ford Cancer Institute, Detroit (I.I.R.); Memorial Sloan Kettering Cancer Center, New York (K.C.A., G.J.R., P.L.); Chao Family Comprehensive Cancer Center, University of California, Irvine, School of Medicine, Orange (V.W.Z., S.S.Z., S.-H.I.O.), Boundless Bio, La Jolla (J.W., J.C.), and Mirati Therapeutics, San Diego (L.D.E., L.W., J.D.L., P.O., J.G.C.) - all in California; Sarah Cannon Research Institute, Tennessee Oncology/OneOncology, Nashville (M.L.J.); the University of Colorado, Aurora (T.P.); and Resolution Bioscience, Kirkland, WA (L.P.L., K.G., M.L.).
Background:
Clinical trials of the KRAS inhibitors adagrasib and sotorasib have shown promising activity in cancers harboring KRAS glycine-to-cysteine amino acid substitutions at codon 12 (KRASG12C). The mechanisms of acquired resistance to these therapies are currently unknown.
Methods:
Among patients with KRAS -mutant cancers treated with adagrasib monotherapy, we performed genomic and histologic analyses that compared pretreatment samples with those obtained after the development of resistance. Cell-based experiments were conducted to study mutations that confer resistance to KRASG12C inhibitors.
Results:
A total of 38 patients were included in this study: 27 with non-small-cell lung cancer, 10 with colorectal cancer, and 1 with appendiceal cancer. Putative mechanisms of resistance to adagrasib were detected in 17 patients (45% of the cohort), of whom 7 (18% of the cohort) had multiple coincident mechanisms. Acquired KRAS alterations included G12D/R/V/W, G13D, Q61H, R68S, H95D/Q/R, Y96C, and high-level amplification of the KRAS allele. Acquired bypass mechanisms of resistance included MET amplification; activating mutations in NRAS, BRAF, MAP2K1, and RET; oncogenic fusions involving ALK, RET, BRAF, RAF1, and FGFR3; and loss-of-function mutations in NF1 and PTEN. In two of nine patients with lung adenocarcinoma for whom paired tissue-biopsy samples were available, histologic transformation to squamous-cell carcinoma was observed without identification of any other resistance mechanisms. Using an in vitro deep mutational scanning screen, we systematically defined the landscape of KRAS mutations that confer resistance to KRASG12C inhibitors.
Conclusions:
Diverse genomic and histologic mechanisms impart resistance to covalent KRASG12C inhibitors, and new therapeutic strategies are required to delay and overcome this drug resistance in patients with cancer. (Funded by Mirati Therapeutics and others; ClinicalTrials.gov number, NCT03785249.).
Insights
Resistance to KRAS G12C inhibitors like adagrasib emerges through diverse genetic alterations and histologic changes. Understanding these mechanisms is crucial for developing new strategies to overcome drug resistance in cancer patients.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- KRAS G12C inhibitors (adagrasib, sotorasib) show promise in clinical trials for KRAS G12C-mutant cancers.
- Mechanisms of acquired resistance to these targeted therapies remain largely unknown.
Purpose of the Study:
- To investigate the genomic and histologic mechanisms of acquired resistance to adagrasib monotherapy in KRAS-mutant cancers.
- To identify specific mutations and alterations that confer resistance to KRAS G12C inhibitors.
Main Methods:
- Genomic and histologic analyses of pretreatment and post-resistance samples from patients treated with adagrasib.
- Cell-based experiments utilizing deep mutational scanning to define resistance-conferring KRAS mutations.
Main Results:
- Resistance mechanisms were identified in 45% of patients, with 18% exhibiting multiple mechanisms.
- Acquired KRAS alterations (e.g., G12D/R/V/W, G13D) and bypass pathways (e.g., MET amplification, NRAS/BRAF mutations) were observed.
- Histologic transformation to squamous-cell carcinoma occurred in some lung adenocarcinoma patients.
Conclusions:
- Diverse genomic and histologic mechanisms contribute to resistance against covalent KRAS G12C inhibitors.
- New therapeutic strategies are essential to delay and overcome acquired drug resistance in cancer treatment.
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