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Quantification of relative neurite tortuosity using Fourier transforms
Benjamin Smith1, Ananya Datta2, Justin Lee2
1School of Optometry, University of California, Berkeley, CA 94720, USA; Graduate Program in Vision Science, University of California, Berkeley, CA 94720, USA.
Journal of Neuroscience Methods
|June 24, 2021
Summary
Quantifying nerve fiber tortuosity is crucial for disease monitoring. A new Fourier transform method accurately measures tortuosity in nerve networks without full segmentation, improving disease evaluation.
Area of Science:
- Neuroscience
- Biomedical Imaging
- Ophthalmology
Background:
- Nerve fiber tortuosity is a key indicator for various ocular and systemic diseases.
- Quantifying tortuosity in dense nerve networks is challenging with current methods requiring manual segmentation or scoring.
Purpose of the Study:
- To develop a novel method for accurately quantifying nerve fiber tortuosity.
- To enable tortuosity analysis without complete nerve network segmentation.
- To adapt the method for multi-scale analysis.
Main Methods:
- Utilized Fourier transforms of segmented nerve masks to quantify directional coherence.
- Adapted the method to analyze tortuosity at different length and size scales.
- Applied the method to simulated data and murine corneal neurite images.
Main Results:
- Accurately quantified neurite tortuosity in simulated datasets across multiple scales.
- Successfully distinguished scale-variant and scale-invariant tortuosity.
- Identified known differences in corneal neurite tortuosity between central and peripheral regions.
Conclusions:
- Introduced a novel Fourier transform-based method for neurite tortuosity quantification.
- The method works with incompletely segmented neurites and at multiple scales.
- Eliminates the need for manual training or curation, enabling rapid and accurate measurements for disease evaluation.

