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Updated: Nov 1, 2025

Characterizing Individual Protein Aggregates by Infrared Nanospectroscopy and Atomic Force Microscopy
Published on: September 12, 2019
Structure and refractive index of fibrin protofibril aggregates according to laser phase microscopy accompanied by
M N Kirichenko1, A V Shkirin2, L L Chaikov1
1Lebedev Physical Institute of the Russian Academy of Sciences, Leninskiy prospekt, 53, Moscow, 119991, Russia.
Abstract:
The structures, sizes, and refractive indices (RI) of protein aggregates formed in a fibrinogen-thrombin system are examined using laser phase microscopy (LPM) accompanied by dynamic light scattering (DLS) and atomic force microscopy (AFM) measurements. Fibrin aggregates found in pure fibrinogen and fibrinogen with thrombin solutions by the DLS method, after drying the sample, form complex structures of different shapes and sizes on a glass surface. The LPM reveals submicron-sized dimeric structures in the pure fibrinogen solution, elongated micron-length structures, and rectangular structures in the fibrinogen-thrombin sample. AFM measurements show that the elongated structures form branched fibers, which in turn assembly into rectangular structures. All sizes obtained by LPM and AFM are consistent with DLS measurements. The refractive indices of all the structures, estimated by optical thickness, vary from 1.53 to 1.62, which indicates that they are fibrinogen derivatives. Effective visualization of the structure and determination of the optical properties for fibrin gel indicate that laser phase microscopy is capable of tissue imaging and characterization.

