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Updated: Oct 31, 2025

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Microfluidic Tools for Probing Fungal-Microbial Interactions at the Cellular Level
Published on: June 23, 2022
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Bacteria-fungal Confrontation and Fungal Growth Prevention Assay
Rahul Kumar1, Durga Madhab Swain1, Sunil Kumar Yadav1
1Plant Microbe Interactions Laboratory, National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India.
Bio-Protocol
|June 28, 2021
Summary
Certain bacteria, like Burkholderia gladioli, can consume fungi for nutrients, a process called bacterial mycophagy. This study details methods to investigate these interactions, aiding in the discovery of new antifungal compounds.
Area of Science:
- Microbiology
- Plant Pathology
- Biochemistry
Background:
- Bacterial mycophagy, where bacteria utilize fungal biomass as a nutrient source, is a known phenomenon.
- Understanding the mechanisms of bacterial mycophagy is crucial for developing strategies against fungal diseases.
- Rhizoctonia solani is a significant necrotrophic fungal pathogen causing sheath blight in rice.
Purpose of the Study:
- To describe validated and efficient methods for studying bacterial-fungal interactions.
- To investigate the mycophagous ability of Burkholderia gladioli strain NGJ1 on Rhizoctonia solani.
- To facilitate the discovery of novel antifungal molecules from mycophagous bacteria.
Main Methods:
- Co-culture assays to observe direct interactions between Burkholderia gladioli NGJ1 and Rhizoctonia solani.
- Microscopic examination to visualize bacterial colonization and consumption of fungal hyphae.
- Quantitative measurements of fungal biomass reduction in the presence of bacteria.
Main Results:
- Burkholderia gladioli strain NGJ1 demonstrated significant mycophagous activity against Rhizoctonia solani.
- The study successfully established methodologies for studying bacterial mycophagy in vitro.
- The interaction revealed potential for B. gladioli to control R. solani growth.
Conclusions:
- The developed methodologies provide a robust platform for studying bacterial-fungal confrontations.
- This research supports the potential of bacterial mycophagy as a biocontrol strategy against fungal pathogens.
- Further exploration of B. gladioli NGJ1-R. solani interactions may yield novel antifungal compounds.

