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Related Concept Videos

Centrifugation01:05

Centrifugation

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Centrifugation is a separation technique based on differences in density or size. It is commonly used to separate solids from aqueous interferents. During centrifugation, the sample is placed in centrifugation tubes and spun at high angular velocity, which allows centrifugal force to act differentially on the different densities or masses of the components. After spinning, the supernatant liquid is decanted. Depending on the specific application, either the pellet or the supernatant is retained...
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Alphavirus Purification Using Low-speed Spin Centrifugation.

Vamseedhar Rayaprolu1, Jolene Ramsey1, Joseph Che-Yen Wang1

  • 1Department of Biology, Indiana University, Bloomington, IN, USA.

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|June 28, 2021
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Summary

A new protocol uses low-speed centrifugation to efficiently purify both wild-type and mutant enveloped virus particles. This method simplifies handling and increases yield for structural studies.

Keywords:
Assembly mutantsCentrifugationEnveloped virus purification

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Area of Science:

  • Virology
  • Biochemistry
  • Structural Biology

Background:

  • Traditional methods for virus purification, such as chemical and sedimentation procedures, are effective for wild-type viruses.
  • These standard techniques often fail for mutant viruses exhibiting assembly defects, limiting structural and imaging studies.

Purpose of the Study:

  • To develop an improved protocol for purifying enveloped virus particles, including those with assembly defects.
  • To enhance the yield and simplify the handling steps required for virus purification.

Main Methods:

  • Combined two previously published methods (Atasheva et al., 2013; Moller-Tank et al., 2013).
  • Utilized low-speed centrifugation as the primary purification technique.
  • Applied the protocol to both wild-type and mutant enveloped virus particles.

Main Results:

  • Achieved high yield purification of both wild-type and mutant enveloped virus particles.
  • The protocol requires minimal handling steps compared to conventional methods.
  • Successfully purified alphavirus particles for subsequent imaging and structural analyses (Wang et al., 2015; Ramsey et al., 2017).

Conclusions:

  • The developed low-speed centrifugation protocol offers an efficient and robust method for purifying diverse enveloped virus particles.
  • This simplified approach facilitates structural and imaging studies of viruses, particularly those with genetic mutations affecting assembly.