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Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
p53-intact cancers escape tumor suppression through loss of long noncoding RNA Dino
Christina B Marney1, Erik S Anderson1, Mutayyaba Adnan1
1Division of Translational Oncology, Department of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, NY 10128, USA.
Abstract:
Many long noncoding RNA (lncRNA) genes exist near cancer-associated loci, yet evidence connecting lncRNA functions to recurrent genetic alterations in cancer are lacking. Here, we report that DINO, the lncRNA transcribed from the cancer-associated DINO/CDKN1A locus, suppresses tumor formation independent of p21, the protein encoded at the locus. Loss of one or two alleles of Dino impairs p53 signaling and apoptosis, resulting in a haplo-insufficient tumor suppressor phenotype in genetically defined mouse models of tumorigenesis. A discrete region of the DINO/CDKN1A locus is recurrently hypermethylated in human cancers, silencing DINO but not CDKN1A, the gene encoding p21. Hypermethylation silences DINO, impairs p53 signaling pathway in trans, and is mutually exclusive with TP53 alterations, indicating that DINO and TP53 comprise a common tumor suppressor module. Therefore, DINO encodes a lncRNA essential for tumor suppression that is recurrently silenced in human cancers as a mechanism to escape p53-dependent tumor suppression.
Insights
The long noncoding RNA DINO acts as a tumor suppressor by regulating the p53 pathway. Its silencing through hypermethylation in human cancers promotes tumor formation, independent of p21.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Long noncoding RNAs (lncRNAs) are increasingly implicated in cancer, but their direct functional links to genetic alterations remain unclear.
- The DINO/CDKN1A locus is associated with cancer, yet the specific role of the lncRNA DINO in tumorigenesis is not well understood.
Purpose of the Study:
- To investigate the function of the lncRNA DINO in tumor suppression.
- To determine the mechanism by which DINO affects cancer development and its relationship with p53 signaling and p21.
Main Methods:
- Utilized genetically defined mouse models to study the in vivo function of Dino.
- Analyzed DNA methylation patterns in human cancers to identify alterations affecting the DINO/CDKN1A locus.
- Investigated the impact of DINO silencing on p53 signaling and apoptosis.
Main Results:
- DINO suppresses tumor formation independently of the p21 protein.
- Loss of Dino alleles leads to impaired p53 signaling and apoptosis, causing a haplo-insufficient tumor suppressor phenotype.
- Recurrent hypermethylation of a specific region in the DINO/CDKN1A locus silences DINO in human cancers, while sparing CDKN1A.
- DINO silencing impairs the p53 signaling pathway in trans and is mutually exclusive with TP53 alterations.
Conclusions:
- DINO is a critical lncRNA tumor suppressor that functions independently of p21.
- Hypermethylation-induced silencing of DINO is a recurrent mechanism in human cancers, contributing to the evasion of p53-dependent tumor suppression.
- DINO and TP53 form a tumor suppressor module frequently disrupted in cancer.
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