Three-Dimensional Cell Metabolomics Deciphers the Anti-Angiogenic Properties of the Radioprotectant Amifostine
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Updated: Oct 30, 2025

Advancements in the Metabolic Profiling of Three-Dimensional Brain Tumor Spheroids for Drug Screening
Published on: September 5, 2025
Theodora Katsila1,2, Styliani A Chasapi3, Jose Carlos Gomez Tamayo4
1Institute of Chemical Biology, National Hellenic Research Foundation, 11635 Athens, Greece.
Abstract:
Aberrant angiogenesis is a hallmark for cancer and inflammation, a key notion in drug repurposing efforts. To delineate the anti-angiogenic properties of amifostine in a human adult angiogenesis model via 3D cell metabolomics and upon a stimulant-specific manner, a 3D cellular angiogenesis assay that recapitulates cell physiology and drug action was coupled to untargeted metabolomics by liquid chromatography-mass spectrometry and nuclear magnetic resonance spectroscopy. The early events of angiogenesis upon its most prominent stimulants (vascular endothelial growth factor-A or deferoxamine) were addressed by cell sprouting measurements. Data analyses consisted of a series of supervised and unsupervised methods as well as univariate and multivariate approaches to shed light on mechanism-specific inhibitory profiles. The 3D untargeted cell metabolomes were found to grasp the early events of angiogenesis. Evident of an initial and sharp response, the metabolites identified primarily span amino acids, sphingolipids, and nucleotides. Profiles were pathway or stimulant specific. The amifostine inhibition profile was rather similar to that of sunitinib, yet distinct, considering that the latter is a kinase inhibitor. Amifostine inhibited both. The 3D cell metabolomics shed light on the anti-angiogenic effects of amifostine against VEGF-A- and deferoxamine-induced angiogenesis. Amifostine may serve as a dual radioprotective and anti-angiogenic agent in radiotherapy patients.
Insights
Amifostine demonstrates anti-angiogenic effects by inhibiting early angiogenesis events. This study used 3D cell metabolomics to reveal amifostine
Area of Science:
- Oncology
- Pharmacology
- Biochemistry
Background:
- Aberrant angiogenesis is critical in cancer and inflammation.
- Drug repurposing is a key strategy for novel therapeutic development.
- Understanding anti-angiogenic mechanisms is vital for cancer treatment.
Purpose of the Study:
- To investigate the anti-angiogenic properties of amifostine.
- To utilize 3D cell metabolomics for mechanistic insights.
- To assess amifostine's effects on specific angiogenesis stimulants.
Main Methods:
- A 3D cellular angiogenesis assay was employed.
- Untargeted metabolomics using liquid chromatography-mass spectrometry and nuclear magnetic resonance spectroscopy.
- Cell sprouting measurements and advanced data analysis methods.
Main Results:
- 3D cell metabolomics captured early angiogenesis events.
- Metabolites identified included amino acids, sphingolipids, and nucleotides.
- Amifostine exhibited a distinct inhibition profile compared to sunitinib, inhibiting both VEGF-A and deferoxamine-induced angiogenesis.
Conclusions:
- 3D cell metabolomics effectively elucidates amifostine's anti-angiogenic effects.
- Amifostine shows potential as a dual radioprotective and anti-angiogenic agent.
- Findings support amifostine's role in managing angiogenesis-related conditions.
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