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Weak-instrument robust tests in two-sample summary-data Mendelian randomization
1Department of Statistics, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Abstract:
Mendelian randomization (MR) has been a popular method in genetic epidemiology to estimate the effect of an exposure on an outcome using genetic variants as instrumental variables (IV), with two-sample summary-data MR being the most popular. Unfortunately, instruments in MR studies are often weakly associated with the exposure, which can bias effect estimates and inflate Type I errors. In this work, we propose test statistics that are robust under weak-instrument asymptotics by extending the Anderson-Rubin, Kleibergen, and the conditional likelihood ratio test in econometrics to two-sample summary-data MR. We also use the proposed Anderson-Rubin test to develop a point estimator and to detect invalid instruments. We conclude with a simulation and an empirical study and show that the proposed tests control size and have better power than existing methods with weak instruments.
Insights
This study introduces new statistical tests for Mendelian randomization (MR) that are robust to weak instruments, improving accuracy in genetic epidemiology research.
Area of Science:
- Genetic Epidemiology
- Statistical Genetics
- Econometrics
Background:
- Mendelian randomization (MR) is widely used to infer causal relationships between exposures and outcomes using genetic variants as instrumental variables (IV).
- Two-sample summary-data MR is particularly popular but susceptible to bias and inflated Type I errors when instruments are weakly associated with the exposure.
- Weak instrument bias is a significant challenge in genetic epidemiology, potentially leading to unreliable causal effect estimates.
Purpose of the Study:
- To develop novel statistical test statistics for two-sample summary-data Mendelian randomization that are robust under weak-instrument asymptotics.
- To extend established econometric tests, including the Anderson-Rubin, Kleibergen, and conditional likelihood ratio tests, to the MR context.
- To provide a robust point estimator and a method for detecting invalid instruments based on the proposed Anderson-Rubin test.
Main Methods:
- Extension of Anderson-Rubin, Kleibergen, and conditional likelihood ratio tests from econometrics to two-sample summary-data MR.
- Development of a point estimator using the proposed Anderson-Rubin test.
- Creation of a method for invalid instrument detection.
- Validation through simulation studies and an empirical analysis.
Main Results:
- The proposed test statistics demonstrate robustness under weak-instrument asymptotics in Mendelian randomization.
- The new methods effectively control Type I errors and mitigate bias associated with weak instruments.
- The Anderson-Rubin test provides a reliable point estimator and aids in identifying invalid instruments.
- Simulations and empirical results show improved power compared to existing methods when dealing with weak instruments.
Conclusions:
- The developed statistical tests offer a more reliable approach to Mendelian randomization analysis, particularly in the presence of weak instruments.
- These robust methods enhance the accuracy and validity of causal inference in genetic epidemiology.
- The findings suggest that the proposed extensions provide superior performance over existing techniques for Mendelian randomization studies with weak instruments.
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