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Updated: Oct 30, 2025

High-resolution In Vivo Manual Segmentation Protocol for Human Hippocampal Subfields Using 3T Magnetic Resonance Imaging
Published on: November 10, 2015
Analysis of hippocampal subfields in sickle cell disease using ultrahigh field MRI
Tales Santini1, Minseok Koo1, Nadim Farhat1
1Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, United States.
Insights
Sickle cell disease (SCD) is linked to smaller hippocampal volumes, particularly in the Dentate Gyrus and Cornu Ammonis (CA) 2-3 regions. This suggests potential neurological impacts in SCD patients.
Area of Science:
- Neuroimaging
- Neurology
- Genetics
Background:
- Sickle cell disease (SCD) is an inherited blood disorder causing organ damage, including neurological complications.
- While hippocampal abnormalities are seen in other neurological conditions, their role in SCD is not well-established.
Purpose of the Study:
- To investigate potential abnormalities in hippocampal subregions in individuals with sickle cell disease.
- To explore the association between SCD and structural changes within the hippocampus.
Main Methods:
- Utilized advanced 7 Tesla (7T) MRI with T1- and T2-weighted imaging.
- Performed automatic segmentation of hippocampal subfields in 53 SCD patients (HbSS, HbSC, HbS/beta thalassemia) and 47 healthy controls.
Main Results:
- Individuals with SCD exhibited significantly smaller volumes in the Dentate Gyrus and Cornu Ammonis (CA) 2-3 subregions compared to controls.
- A trend towards reduced volumes was observed in other hippocampal subregions in the SCD group.
Conclusions:
- Sickle cell disease is associated with reduced hippocampal subfield volumes, specifically impacting the Dentate Gyrus and CA 2-3.
- These findings suggest structural brain changes in SCD and warrant further investigation into their mechanisms and cognitive implications.
Abstract:
Sickle cell disease (SCD) is an inherited hemoglobinopathy that causes organ dysfunction, including cerebral vasculopathy and neurological complications. Hippocampal segmentation with newer and advanced 7 Tesla (7T) MRI protocols has revealed atrophy in specific subregions in other neurodegenerative and neuroinflammatory diseases, however, there is limited evidence of hippocampal involvement in SCD. Thus, we explored whether SCD may be also associated with abnormalities in hippocampal subregions. We conducted 7T MRI imaging in individuals with SCD, including the HbSS, HbSC and HbS/beta thalassemia genotypes (n = 53), and healthy race and age-matched controls (n = 47), using a customized head coil. Both T1- and T2-weighted images were used for automatic segmentation of the hippocampal subfields. Individuals with SCD had, on average, significantly smaller volume of the region including the Dentate Gyrus and Cornu Ammonis (CA) 2 and 3 as compared to the control group. Other hippocampal subregions also showed a trend towards smaller volumes in the SCD group. These findings support and extend previous reports of reduced volume in the temporal lobe in SCD patients. Further studies are necessary to investigate the mechanisms that lead to structural changes in the hippocampus subfields and their relationship with cognitive performance in SCD patients.
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