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Spatial and Temporal Control of Murine Melanoma Initiation from Mutant Melanocyte Stem Cells
Published on: June 7, 2019
Novel MAPK/AKT-impairing germline NRAS variant identified in a melanoma-prone family
Kevin M Brown1, Mai Xu1, Michael Sargen1
1Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, 9609 Medical Center Drive, EPS 7106, Bethesda, MD, 20892, USA.
Abstract:
While several high-penetrance melanoma risk genes are known, variation in these genes fail to explain melanoma susceptibility in a large proportion of high-risk families. As part of a melanoma family sequencing study, including 435 families from Mediterranean populations we identified a novel NRAS variant (c.170A > C, p.D57A) in an Italian melanoma-prone family. This variant is absent in exomes in gnomAD, ESP, UKBiobank, and the 1000 Genomes Project, as well as in 11,273 Mediterranean individuals and 109 melanoma-prone families from the US and Australia. This variant occurs in the GTP-binding pocket of NRAS. Differently from other RAS activating alterations, NRAS D57A expression is unable to activate MAPK-pathway both constitutively and after stimulation but enhances EGF-induced PI3K-pathway signaling in serum starved conditions in vitro. Consistent with in vitro data demonstrating that NRAS D57A does not enrich GTP binding, molecular modeling suggests that the D57A substitution would be expected to impair Mg2 + binding and decrease nucleotide-binding and GTPase activity of NRAS. While we cannot firmly establish NRAS c.170A > C (p.D57A) as a melanoma susceptibility variant, further investigation of NRAS as a familial melanoma gene is warranted.
Insights
Researchers identified a novel NRAS gene variant in an Italian family with a history of melanoma. This NRAS variant impacts signaling pathways, warranting further investigation into NRAS
Area of Science:
- Genetics
- Oncology
- Molecular Biology
Background:
- Known high-penetrance melanoma risk genes do not explain all familial melanoma cases.
- A significant proportion of melanoma susceptibility remains unexplained in high-risk families.
Purpose of the Study:
- To identify novel genetic variants associated with familial melanoma risk.
- To investigate the functional impact of a newly identified NRAS variant (c.170A>C, p.D57A) in melanoma-prone families.
Main Methods:
- Sequencing of 435 Mediterranean melanoma-prone families.
- In vitro functional assays to assess NRAS D57A pathway activation (MAPK, PI3K).
- Molecular modeling to predict the effect of the D57A substitution on NRAS protein function.
Main Results:
- A novel NRAS variant (c.170A>C, p.D57A) was identified in an Italian melanoma-prone family.
- This variant was absent in large population and patient databases.
- NRAS D57A did not activate the MAPK pathway but enhanced EGF-induced PI3K signaling in vitro, suggesting impaired GTP binding and reduced GTPase activity.
Conclusions:
- The novel NRAS variant c.170A>C (p.D57A) warrants further investigation as a potential familial melanoma susceptibility gene.
- NRAS may play a role in melanoma predisposition through mechanisms distinct from canonical RAS pathway activation.
- Further research is needed to confirm the role of NRAS in familial melanoma.
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