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Updated: Oct 30, 2025

Studying Triple Negative Breast Cancer Using Orthotopic Breast Cancer Model
Published on: March 20, 2020
Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast Cancer
Miquel Ensenyat-Mendez1, Pere Llinàs-Arias1, Javier I J Orozco2
1Cancer Epigenetics Laboratory at the Cancer Cell Biology Group, Institut d'Investigació Sanitària Illes Balears (IdISBa), Palma, Spain.
Abstract:
Triple-negative breast cancer (TNBC) is a highly heterogeneous disease defined by the absence of estrogen receptor (ER) and progesterone receptor (PR) expression, and human epidermal growth factor receptor 2 (HER2) overexpression that lacks targeted treatments, leading to dismal clinical outcomes. Thus, better stratification systems that reflect intrinsic and clinically useful differences between TNBC tumors will sharpen the treatment approaches and improve clinical outcomes. The lack of a rational classification system for TNBC also impacts current and emerging therapeutic alternatives. In the past years, several new methodologies to stratify TNBC have arisen thanks to the implementation of microarray technology, high-throughput sequencing, and bioinformatic methods, exponentially increasing the amount of genomic, epigenomic, transcriptomic, and proteomic information available. Thus, new TNBC subtypes are being characterized with the promise to advance the treatment of this challenging disease. However, the diverse nature of the molecular data, the poor integration between the various methods, and the lack of cost-effective methods for systematic classification have hampered the widespread implementation of these promising developments. However, the advent of artificial intelligence applied to translational oncology promises to bring light into definitive TNBC subtypes. This review provides a comprehensive summary of the available classification strategies. It includes evaluating the overlap between the molecular, immunohistochemical, and clinical characteristics between these approaches and a perspective about the increasing applications of artificial intelligence to identify definitive and clinically relevant TNBC subtypes.
Insights
Triple-negative breast cancer (TNBC) lacks targeted treatments due to its heterogeneity. Artificial intelligence offers a promising approach to identify definitive TNBC subtypes for improved treatment strategies and patient outcomes.
Area of Science:
- Oncology
- Genomics
- Bioinformatics
Background:
- Triple-negative breast cancer (TNBC) is a heterogeneous cancer lacking targeted therapies, leading to poor outcomes.
- Current TNBC classification systems do not fully capture intrinsic tumor differences, hindering treatment optimization.
- Advances in molecular profiling generate vast data but face integration and cost challenges for widespread clinical use.
Purpose of the Study:
- To review existing TNBC classification strategies and their molecular, immunohistochemical, and clinical correlations.
- To explore the potential of artificial intelligence in defining clinically relevant TNBC subtypes.
- To provide a perspective on advancing TNBC treatment through improved stratification.
Main Methods:
- Comprehensive literature review of TNBC classification methodologies.
- Analysis of genomic, epigenomic, transcriptomic, and proteomic data integration challenges.
- Evaluation of artificial intelligence applications in translational oncology for cancer subtyping.
Main Results:
- Multiple TNBC stratification methods have emerged, driven by high-throughput technologies and bioinformatics.
- Integration of diverse molecular data and cost-effective classification remain significant hurdles.
- Artificial intelligence shows potential for definitive TNBC subtype identification.
Conclusions:
- Improved TNBC stratification is crucial for developing targeted therapies and enhancing patient outcomes.
- Artificial intelligence presents a transformative opportunity to overcome current classification limitations.
- Future research should focus on integrating AI with multi-omics data for precise TNBC subtyping and treatment selection.

