Related Experiment Video
Updated: Oct 30, 2025

RNA Pull-down Procedure to Identify RNA Targets of a Long Non-coding RNA
Published on: April 10, 2018
lncRNA MALAT1 regulated ATAD2 to facilitate retinoblastoma progression via miR-655-3p
Yuxin Zhao1, Zhaoxia Wang2, Meili Gao1
1Department of Ophthalmology, Weihai Central Hospital, No. 3, Mishandongluxi, Wendeng District, Weihai, 264400, Shandong, China.
Abstract:
Long noncoding RNA (lncRNA) metastasis-associated lung adenocarcinoma transcript 1 (MALAT1) was reported as an oncogene in many tumors including retinoblastoma (RB). This research mainly focused on the functions and mechanism of MALAT1 in RB. MALAT1 was upregulated in RB tissues and cells, and it served as a competing endogenous RNA (ceRNA) and inhibited miRNA-655-3p (miR-655-3p) expression, which eventually regulated the expression of miR-655-3p downstream target ATPase Family AAA Domain Containing 2 (ATAD2). The level of ATAD2 significantly increased, while that of miR-655-3p remarkably decreased in RB tissues and cells. MALAT1 depletion inhibited cell proliferation, metastasis, and epithelial-mesenchymal transition (EMT), but promoted apoptosis in vitro and blocked xenograft tumor growth in vivo. MALAT1 exerted its oncogenic functions in RB by regulating miR-655-3p/ATAD2 axis.
Insights
Long noncoding RNA MALAT1 acts as an oncogene in retinoblastoma (RB). It promotes RB progression by inhibiting miR-655-3p, leading to increased ATAD2 expression and tumor growth.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Long noncoding RNA (lncRNA) metastasis-associated lung adenocarcinoma transcript 1 (MALAT1) is implicated as an oncogene in various cancers.
- Retinoblastoma (RB) is a significant ocular malignancy where the role of MALAT1 requires further elucidation.
Purpose of the Study:
- To investigate the functional role and underlying molecular mechanism of MALAT1 in retinoblastoma.
- To explore the regulatory relationship between MALAT1, miR-655-3p, and ATAD2 in RB.
Main Methods:
- Quantitative real-time PCR to assess MALAT1, miR-655-3p, and ATAD2 expression levels in RB tissues and cells.
- In vitro assays including cell proliferation, apoptosis, and epithelial-mesenchymal transition (EMT) assays following MALAT1 knockdown.
- In vivo xenograft tumor growth assays in a mouse model.
- Bioinformatic analysis and luciferase reporter assays to confirm the interaction between MALAT1, miR-655-3p, and ATAD2.
Main Results:
- MALAT1 was significantly upregulated in RB tissues and cells compared to normal controls.
- MALAT1 acted as a competing endogenous RNA (ceRNA), sponging miR-655-3p and consequently increasing the expression of its target, ATAD2.
- MALAT1 depletion suppressed RB cell proliferation, metastasis, and EMT, induced apoptosis in vitro, and inhibited tumor growth in vivo.
- miR-655-3p levels were decreased, while ATAD2 levels were increased in RB tissues and cells.
Conclusions:
- MALAT1 functions as an oncogene in retinoblastoma by regulating the miR-655-3p/ATAD2 axis.
- Targeting the MALAT1/miR-655-3p/ATAD2 pathway presents a potential therapeutic strategy for retinoblastoma.
Related Concept Videos
lncRNA - Long Non-coding RNAs
lncRNA - Long Non-coding RNAs
The Retinoblastoma Gene
The first-ever tumor suppressor gene called Rb was identified in retinoblastoma - a rare eye tumor in children. In inherited forms of the disease, a child inherits one defective copy of the Rb gene, which predisposes them to retinoblastoma. However,...
MicroRNAs
MicroRNAs
mTOR Signaling and Cancer Progression
The mTOR pathway or the...
