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Updated: Oct 29, 2025

Detection of Homologous Recombination Intermediates via Proximity Ligation and Quantitative PCR in Saccharomyces cerevisiae
Published on: September 11, 2022
Distinct pathways of homologous recombination controlled by the SWS1-SWSAP1-SPIDR complex
Rohit Prakash1, Thomas Sandoval2, Florian Morati3
1Developmental Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA. rohitpraka@gmail.com.
The SWS1-SWSAP1-SPIDR complex regulates distinct types of homology-directed repair (HDR), crucial for genomic integrity. This complex is vital for inter-homolog HDR and influences cancer-related genetic instability.
Area of Science:
- Genetics
- Molecular Biology
- DNA Repair Mechanisms
Background:
- Homology-directed repair (HDR) is a critical DNA repair pathway in mammalian cells, ensuring genomic integrity.
- The factors controlling diverse HDR outcomes remain incompletely understood.
- Understanding these factors is crucial for comprehending genomic stability and disease development.
Purpose of the Study:
- To elucidate the role of the SWS1-SWSAP1-SPIDR complex in regulating different types of homology-directed repair (HDR).
- To identify specific factors controlling distinct HDR outcomes and their impact on genomic integrity.
- To investigate the functional significance of SWS1-SWSAP1-SPIDR in mitotic HDR and its relationship with other cellular processes.
Main Methods:
- Investigated the function of the SWS1-SWSAP1-SPIDR complex in mammalian DNA repair.
- Utilized genetic approaches to assess the requirement of these proteins for various HDR pathways.
- Analyzed the impact of SWS1-SWSAP1-SPIDR on RAD51 recombinase assembly, sister-chromatid exchange, and loss of heterozygosity.
- Studied the genetic interactions between SWS1-SWSAP1-SPIDR and BLM helicase deficiency.
Main Results:
- The SWS1-SWSAP1-SPIDR complex is essential for inter-homolog HDR, representing the first identified mitotic factor specific to this function.
- These proteins are not required for intra-chromosomal HDR, explaining the viability of patients and mice with mutations.
- SWS1-SWSAP1-SPIDR promotes high levels of sister-chromatid exchange and long-range loss of heterozygosity, processes implicated in cancer initiation.
- Loss of SWSAP1 prolongs the survival of Bloom syndrome (BLM helicase-deficient) mutant embryos.
Conclusions:
- The SWS1-SWSAP1-SPIDR complex plays a critical and specific role in regulating inter-homolog HDR.
- This complex influences key genetic events associated with genomic instability and cancer development.
- SWSAP1 presents a potential therapeutic target for Bloom syndrome and related conditions.
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