Related Experiment Video
Updated: Oct 28, 2025

Automated 3D Optical Coherence Tomography to Elucidate Biofilm Morphogenesis Over Large Spatial Scales
Published on: August 21, 2019
A novel automatic 3D stitching algorithm for optical coherence tomography angiography and its application in
Yubo Ji1, Kanheng Zhou1, Sally Helen Ibbotson2
1School of Science and Engineering, University of Dundee, Dundee, Scotland, UK.
We developed an automated 3D stitching method to create high-resolution, large field-of-view skin imaging using Optical Coherence Tomography (OCT) and OCT Angiography (OCTA). This technique overcomes FOV limitations and improves image quality for skin lesion analysis.
Area of Science:
- Biomedical Imaging
- Dermatology
- Optical Engineering
Background:
- Optical Coherence Tomography (OCT) and OCT Angiography (OCTA) are valuable for skin imaging.
- Current OCT/OCTA systems have limited fields of view (FOV), hindering comprehensive skin lesion assessment.
- Expanding FOV with wide-field lenses often compromises lateral resolution.
Purpose of the Study:
- To develop and validate an automated 3D stitching method for large FOV, high-resolution OCT/OCTA skin imaging.
- To overcome the resolution-FOV trade-off in current OCT/OCTA skin imaging techniques.
- To enable detailed visualization of skin structures and vasculature over larger areas.
Main Methods:
- Developed an automated 3D stitching algorithm to montage adjacent OCT and OCTA volumes.
- Acquired 3x3 OCT/OCTA datasets (nine volumes per dataset) from healthy skin of six volunteers.
- Evaluated image quality using structural similarity index, feature similarity index, and vessel contrast-noise-ratio (CNR).
Main Results:
- The automated stitching method successfully created high-resolution, large FOV skin volumes.
- Stitched images demonstrated superior similarity to single-scan protocols for large-scale imaging.
- Vessel CNR improved significantly from 2.07 ± 0.44 (single scan) to 3.05 ± 0.51 (stitched method).
Conclusions:
- The proposed 3D stitching method offers a flexible and repeatable solution for large FOV OCT/OCTA skin imaging.
- This technique effectively enhances image resolution and clarity for detailed skin structure and vascular analysis.
- The method overcomes limitations of current systems, paving the way for improved dermatological diagnostics.
More Related Videos
08:50Longitudinal Morphological and Physiological Monitoring of Three-dimensional Tumor Spheroids Using Optical Coherence Tomography
Published on: February 9, 2019
13:07Optical Coherence Tomography Based Biomechanical Fluid-Structure Interaction Analysis of Coronary Atherosclerosis Progression
Published on: January 15, 2022