Modeling a human CLP1 mutation in mouse identifies an accumulation of tyrosine pre-tRNA fragments causing

Ikuko Morisaki1, Hiroshi Shiraishi1, Hiroyuki Fujinami1

  • 1Department of Cell Biology, Oita University Faculty of Medicine, Yufu, Oita, 879-5593, Japan.

Insights

A mutation in CLP1 (Cleavage factor polyribonucleotide kinase subunit 1) causes pontocerebellar hypoplasia type 10 (PCH10). This study reveals that accumulated RNA fragments, specifically Ile-introns and 5' tRNA fragments, contribute to PCH10 pathogenesis.

Area of Science:

  • Molecular Biology
  • Neuroscience
  • Genetics

Background:

  • Cleavage factor polyribonucleotide kinase subunit 1 (CLP1) is crucial for mRNA processing and tRNA splicing.
  • The R140H mutation in CLP1 is linked to pontocerebellar hypoplasia type 10 (PCH10), a neurodegenerative disorder.
  • Previous studies indicated accumulation of isoleucine pre-tRNA introns (Ile-introns) in PCH10 patients.

Purpose of the Study:

  • To investigate the molecular mechanisms underlying PCH10 pathogenesis caused by the CLP1 R140H mutation.
  • To establish and characterize a CLP1 R140H knock-in mouse model for PCH10 research.
  • To identify the specific RNA species accumulating due to the CLP1 mutation.

Main Methods:

  • Generation of CLP1 R140H knock-in mutant mice.
  • Phenotypic analysis of mutant mice, including motor function and neuronal integrity.
  • Molecular analysis to detect and quantify accumulating RNA fragments in affected tissues.

Main Results:

  • CLP1 R140H mutant mice exhibited progressive upper motor neuron loss and impaired locomotor activity.
  • Intracellular accumulation of Ile-introns and 5' tRNA fragments from tyrosine pre-tRNAs was observed in mutant mice.
  • The observed phenotypes, while milder than human PCH10, validate the mouse model for studying disease mechanisms.

Conclusions:

  • The CLP1 R140H mutation leads to the accumulation of specific tRNA-derived RNA fragments, contributing to neurodegeneration.
  • These accumulated RNA fragments, Ile-introns and 5' tRNA fragments, are implicated in the pathogenesis of PCH10.
  • The CLP1 R140H mouse model offers valuable insights into neurodegenerative diseases linked to tRNA metabolism dysfunction.

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