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Deep Graph Mapper: Seeing Graphs Through the Neural Lens.

Cristian Bodnar1, Cătălina Cangea1, Pietro Liò1

  • 1Department of Computer Science and Technology, University of Cambridge, Cambridge, United Kingdom.

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Summary
This summary is machine-generated.

This study introduces a novel graph summarization method by merging the Mapper algorithm with graph neural networks (GNNs). This topologically grounded approach offers a flexible framework for graph pooling, achieving competitive results and enabling new visualizations.

Keywords:
graph classificationgraph neural networksgraph summarizationmapperpooling

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Area of Science:

  • Computational topology
  • Graph theory
  • Machine learning

Background:

  • Graph summarization faces challenges with arbitrary data structures, unlike grid-like image data.
  • Existing pooling methods may not fully capture complex graph topologies.

Purpose of the Study:

  • To develop topologically grounded graph summaries using the Mapper algorithm and graph neural networks (GNNs).
  • To establish Mapper as a generalized framework for graph pooling.
  • To introduce novel pooling algorithms and visualize complex networks.

Main Methods:

  • Integration of the Mapper algorithm with graph neural networks (GNNs).
  • Mathematical proof demonstrating Mapper as a generalization of soft cluster assignment pooling.
  • Development and application of new pooling algorithms.

Main Results:

  • The proposed method provides topologically grounded graph summaries.
  • Mapper is proven to be a generalization of existing soft cluster assignment pooling methods.
  • Novel pooling algorithms achieve competitive performance against state-of-the-art methods.
  • Successful generation of GNN-aided visualizations for complex networks.

Conclusions:

  • The Mapper algorithm offers a powerful and flexible topological framework for graph pooling.
  • This approach facilitates the design of effective and novel graph pooling strategies.
  • The method enhances the interpretability and visualization of complex network data through GNNs.