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LGAAP: Leishmaniinae Genome Assembly and Annotation Pipeline
Hatim Almutairi1,2, Michael D Urbaniak1, Michelle D Bates1
1Division of Biomedical and Life Sciences, Faculty of Health and Medicine, Lancaster University, Lancaster, United Kingdom.
Microbiology Resource Announcements
|July 22, 2021
Abstract:
We present the LGAAP computational pipeline, which was successfully used to assemble six genomes of the parasite subfamily Leishmaniinae to chromosome-scale completeness from a combination of long- and short-read sequencing data. LGAAP is open source, and we suggest that it may easily be ported for assembly of any genome of comparable size (∼35 Mb).

