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Updated: Oct 26, 2025

Detection of Homologous Recombination Intermediates via Proximity Ligation and Quantitative PCR in Saccharomyces cerevisiae
Published on: September 11, 2022
Physical interactions between MCM and Rad51 facilitate replication fork lesion bypass and ssDNA gap filling by
María J Cabello-Lobato1, Cristina González-Garrido1, María I Cano-Linares1
1Centro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Consejo Superior de Investigaciones Científicas; Universidad de Sevilla; Universidad Pablo de Olavide; Seville, Spain.
Abstract:
The minichromosome maintenance (MCM) helicase physically interacts with the recombination proteins Rad51 and Rad52 from yeast to human cells. We show, in Saccharomyces cerevisiae, that these interactions occur within a nuclease-insoluble scaffold enriched in replication/repair factors. Rad51 accumulates in a MCM- and DNA-binding-independent manner and interacts with MCM helicases located outside of the replication origins and forks. MCM, Rad51, and Rad52 accumulate in this scaffold in G1 and are released during the S phase. In the presence of replication-blocking lesions, Cdc7 prevents their release from the scaffold, thus maintaining the interactions. We identify a rad51 mutant that is impaired in its ability to bind to MCM but not to the scaffold. This mutant is proficient in recombination but partially defective in single-stranded DNA (ssDNA) gap filling and replication fork progression through damaged DNA. Therefore, cells accumulate MCM/Rad51/Rad52 complexes at specific nuclear scaffolds in G1 to assist stressed forks through non-recombinogenic functions.
Insights
Minichromosome maintenance (MCM) helicase and recombination proteins Rad51/Rad52 form nuclear scaffolds in G1. These complexes aid stressed replication forks via non-recombinogenic functions, with Cdc7 regulating their release.
Area of Science:
- Cellular Biology
- Molecular Biology
- DNA Replication and Repair
Background:
- Minichromosome maintenance (MCM) helicase is crucial for DNA replication.
- Rad51 and Rad52 are key proteins involved in DNA recombination and repair.
- Interactions between MCM helicase and recombination proteins are conserved across species.
Purpose of the Study:
- To investigate the physical interactions between MCM helicase, Rad51, and Rad52 in Saccharomyces cerevisiae.
- To elucidate the role of these interactions in DNA replication and repair processes.
- To understand the regulation of these complexes during the cell cycle and in response to DNA damage.
Main Methods:
- Yeast genetics and molecular biology techniques.
- Co-immunoprecipitation assays to detect protein interactions.
- Microscopy to visualize protein localization within nuclear scaffolds.
- Analysis of a rad51 mutant with impaired MCM binding.
Main Results:
- MCM helicase physically interacts with Rad51 and Rad52 in a nuclease-insoluble scaffold.
- Rad51 accumulates independently of MCM and DNA binding, interacting with MCM outside replication origins/forks.
- MCM, Rad51, and Rad52 accumulate in scaffolds in G1 and are released in S phase.
- Cdc7 prevents release from scaffolds in the presence of replication-blocking lesions.
- A rad51 mutant defective in MCM binding shows impaired ssDNA gap filling and fork progression.
Conclusions:
- Cells form MCM/Rad51/Rad52 complexes at nuclear scaffolds in G1.
- These complexes assist stressed replication forks through non-recombinogenic functions.
- Cdc7 plays a role in regulating the release of these complexes during S phase.
- The MCM/Rad51 interaction is important for replication fork stability and DNA repair.
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