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Characterization of Aquatic Biofilms with Flow Cytometry
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Microbial biofilm community dynamics in five lowland streams
Kun Guo1, Naicheng Wu2, Wei Li3
1Department of Biology, Aarhus University, Ole Worms Allé 1, 8000 Aarhus, Denmark; School of Ecological and Environmental Sciences, East China Normal University, 200241 Shanghai, China.
The Science of the Total Environment
|July 30, 2021
Summary
This study reveals that stream biofilm communities, including prokaryotes and eukaryotes, show similar diversity patterns influenced by environmental factors. A multitrophic perspective is crucial for understanding these complex "microbial jungles".
Area of Science:
- Ecology
- Microbiology
- Environmental Science
Background:
- Stream biofilms are crucial for global nutrient cycling.
- Previous research often overlooked the simultaneous dynamics of prokaryotic and eukaryotic communities within biofilms.
- Understanding the full diversity of biofilm communities is essential for ecological assessments.
Purpose of the Study:
- To investigate the community composition and diversity of both prokaryotic and eukaryotic organisms in stream biofilms.
- To explore the influence of hydrological and physico-chemical factors on biofilm dynamics.
- To identify key drivers of variation in stream biofilm communities.
Main Methods:
- Artificial substrates were incubated in five Danish lowland streams with varying conditions.
- Community composition and diversity of prokaryotes and eukaryotes were analyzed.
- Network analysis was employed to reveal trophic and non-trophic interactions.
Main Results:
- Specific phyla (Gammaproteobacteria, Bacteroidetes, Cercozoa) dominated both prokaryotic and eukaryotic communities.
- Prokaryotic and eukaryotic diversity exhibited synchronous temporal peaks in July and January.
- Hydrological and physico-chemical variables explained significant community variation, but a substantial portion remained unexplained.
Conclusions:
- Stream biofilm communities harbor a core set of dominant prokaryotic and eukaryotic taxa.
- Environmental factors significantly shape biofilm community structure, but biological interactions are also critical.
- A multitrophic level perspective, considering trophic and non-trophic interactions, is necessary for a comprehensive understanding of stream biofilms.

