Related Experiment Video
Updated: Aug 1, 2026

Identification of Antibacterial Immunity Proteins in Escherichia coli using MALDI-TOF-TOF-MS/MS and Top-Down Proteomic Analysis
Published on: May 23, 2021
Virulence characterization and clonal analysis of uropathogenic Escherichia coli metallo-beta-lactamase-producing
Fatemeh Zangane Matin1, Seyedeh Elham Rezatofighi2, Mohammad Roayaei Ardakani1
1Department of Biology, Faculty of Science, Shahid Chamran University of Ahvaz, 6135743135, Ahvaz, Iran.
Background:
Uropathogenic Escherichia coli (UPEC) is a major cause of urinary tract infection (UTI); however, treatment of UTI has been challenging due to increased antimicrobial resistance (AMR). One of the most important types of AMR is carbapenem resistance (CR). CR bacteria are known as an important threat to global public health today. Class B metallo-beta-lactamases (MBLs) are one of the major factors for resistance against carbapenems. We aimed to investigate the characteristics of UPEC isolates producing MBL.
Methods:
A cross-sectional study was conducted from October 2018 to December 2019 in Ahvaz; Iran. UPEC isolates were identified by biochemical and molecular methods. Metallo-beta-lactamase-producing isolates were detected using modified carbapenem inactivation method (mCIM) and EDTA-CIM (eCIM) tests. MBL genes, phylogenetic group, and virulence genes profile of carbapenem resistant isolates were determined. Conjugation assay and plasmid profiling were conducted to evaluate the ability of transferring of CR to other E. coli isolates. Clonal similarity of isolates were assessed using Enterobacterial intergenic repetitive element sequence (ERIC)-PCR.
Results:
Among 406 UPEC isolates, 12 (2.95%) carbapenem-resistant were detected of which 11 were phenotypically MBL-producing strains. Four isolates were resistant to all investigated antimicrobial agents and were considered possible pandrug-resistant (PDR). blaNDM, blaOXA-48, blaIMP-1, and blaIMP-2 genes were found in 9, 5, 1, and 1 isolates, respectively. Among 30 virulence genes investigated, the traT, fyuA followed by fimH, and iutA with the frequency of 8 (66.7%), 8 (66.7%), 7 (58.3%), and 7 (58.3%) were the most identified genes, respectively. Siderophore production was the main virulence trait among carbapenem-resistant UPEC isolates. Except for two, all other isolates showed weak to moderate virulence index. In all recovered isolates, CR was readily transmitted via plasmids to other isolates during conjugation experiments.
Conclusion:
MBL and carbapenemase genes, especially blaNDM and blaOXA-48 are spreading rapidly among bacteria, which can be a threat to global public health. Therefore monitoring the emergence and dissemination of new AMR is necessary to continuously refine guidelines for empiric antimicrobial therapy. Understanding the mechanisms of resistance and virulence in this group of bacteria can play an effective role in providing new therapeutic methods.
Insights
Carbapenem-resistant Uropathogenic Escherichia coli (UPEC) producing metallo-beta-lactamases (MBLs) are a growing global health threat. These resistant strains, carrying genes like blaNDM and blaOXA-48, can readily transfer resistance via plasmids.
Area of Science:
- Microbiology
- Infectious Diseases
- Antimicrobial Resistance
Background:
- Uropathogenic Escherichia coli (UPEC) causes frequent urinary tract infections (UTIs).
- Antimicrobial resistance (AMR), particularly carbapenem resistance (CR), poses a significant global health challenge.
- Metallo-beta-lactamases (MBLs) are key enzymes conferring resistance to carbapenems.
Purpose of the Study:
- To investigate the characteristics of MBL-producing UPEC isolates.
- To identify the prevalence of MBL genes and virulence factors in CR UPEC.
- To assess the transferability of carbapenem resistance among UPEC strains.
Main Methods:
- Cross-sectional study of UPEC isolates from October 2018 to December 2019 in Ahvaz, Iran.
- Detection of MBL production using modified carbapenem inactivation (mCIM) and EDTA-CIM (eCIM) tests.
- Molecular identification of MBL, phylogenetic, and virulence genes; conjugation assays; plasmid profiling; and ERIC-PCR for clonal analysis.
Main Results:
- 12 (2.95%) of 406 UPEC isolates were carbapenem-resistant, with 11 being MBL-producing.
- Prevalent MBL genes included blaNDM (9 isolates) and blaOXA-48 (5 isolates).
- Key virulence genes identified were traT, fyuA, fimH, and iutA; CR was transferable via plasmids.
Conclusions:
- The rapid spread of MBL and carbapenemase genes (e.g., blaNDM, blaOXA-48) in UPEC presents a global public health threat.
- Continuous monitoring of emerging AMR is crucial for updating antimicrobial therapy guidelines.
- Understanding resistance and virulence mechanisms is vital for developing novel therapeutic strategies against CR UPEC.
More Related Videos
08:58Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
09:44Characterization of a Pathogenic Escherichia coli Strain Derived from Oreochromis spp. Farms Using Whole-Genome Sequencing
Published on: December 23, 2022
Related Concept Videos
Microbiota of the Urogenital Tract
Determinants of Bacterial Pathogenicity and Virulence
Bacterial Gastroenteritis
Mechanism of Antibiotic Resistance in MRSA
Clinical Significance of Antibiotic Resistance