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Published on: September 28, 2022
Characterization of the first Pseudomonas grimontii bacteriophage, PMBT3
Sabrina Sprotte1, Erik Brinks2, Natalia Wagner2
1Department of Microbiology and Biotechnology, Max Rubner-Institut, Federal Research Institute of Nutrition and Food, Hermann-Weigmann-Str. 1, 24103, Kiel, Germany. sabrina.sprotte@mri.bund.de.
Abstract:
The complete genome sequence of the virulent bacteriophage PMBT3, isolated on the proteolytic Pseudomonas grimontii strain MBTL2-21, showed no significant similarity to other known phage genome sequences, making this phage the first reported to infect a strain of P. grimontii. Electron microscopy revealed PMBT3 to be a member of the family Siphoviridae, with notably long and flexible whiskers. The linear, double-stranded genome of 87,196 bp has a mol% G+C content of 60.4 and contains 116 predicted protein-encoding genes. A putative tellurite resistance (terB) gene, originally reported to occur in the genome of a bacterium, was detected in the genome of phage PMBT3.
Insights
Researchers sequenced the genome of bacteriophage PMBT3, the first phage found to infect Pseudomonas grimontii. This novel phage, belonging to the Siphoviridae family, possesses unique genetic features, including a tellurite resistance gene.
Area of Science:
- Microbiology
- Virology
- Genomics
Background:
- Pseudomonas grimontii is a bacterium that can be infected by bacteriophages.
- Bacteriophages are viruses that infect bacteria and play roles in microbial ecology and evolution.
- Characterizing novel bacteriophages provides insights into viral diversity and host-pathogen interactions.
Purpose of the Study:
- To perform a complete genome sequencing of bacteriophage PMBT3.
- To characterize the morphology and genomic features of PMBT3.
- To determine the phylogenetic relationship of PMBT3 with other known phages.
Main Methods:
- Isolation and purification of bacteriophage PMBT3 from a Pseudomonas grimontii strain.
- Transmission electron microscopy for morphological analysis.
- Whole-genome sequencing and bioinformatic analysis to identify genes and genomic features.
Main Results:
- PMBT3 is the first reported bacteriophage infecting Pseudomonas grimontii.
- Electron microscopy classified PMBT3 as a member of the Siphoviridae family, characterized by long, flexible whiskers.
- The 87,196 bp double-stranded DNA genome contains 116 predicted protein-encoding genes and a putative tellurite resistance (terB) gene.
- The genome sequence showed no significant similarity to other known phage genomes.
Conclusions:
- Bacteriophage PMBT3 represents a novel phage species with a unique host range.
- The discovery of a tellurite resistance gene in a phage genome is noteworthy and warrants further investigation.
- The genomic and morphological data provide a foundation for future studies on PMBT3's biology and ecological role.
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