Host ADP-ribosylation and the SARS-CoV-2 macrodomain

Nicolas C Hoch1

  • 1Department of Biochemistry, University of São Paulo, São Paulo, Brazil.

Insights

SARS-CoV-2 suppresses the interferon response, a key antiviral defense. Understanding how poly(ADP-ribose) polymerases and viral macrodomains interact is crucial for developing COVID-19 treatments.

Area of Science:

  • Immunology
  • Virology
  • Biochemistry

Background:

  • The interferon (IFN) response is critical for innate immunity against viruses.
  • SARS-CoV-2 actively suppresses the IFN response, contributing to viral replication and disease severity.
  • Interferon signaling variability influences COVID-19 disease outcomes.

Purpose of the Study:

  • To review the role of ADP-ribosylation in the IFN response.
  • To explore the function of viral macrodomains in counteracting host antiviral mechanisms.
  • To identify knowledge gaps in host-pathogen interactions affecting the IFN response.

Main Methods:

  • Review of existing literature on ADP-ribosylation, PARPs, and viral macrodomains.
  • Analysis of host-pathogen interactions during SARS-CoV-2 infection.
  • Discussion of the interplay between IFN signaling and post-translational modifications.

Main Results:

  • Several human poly(ADP-ribose) polymerases (PARPs) are induced by IFN and contribute to antiviral defense.
  • PARPs regulate IFN signaling, modulate host processes, and modify viral proteins.
  • SARS-CoV-2 utilizes macrodomains to hydrolyze ADP-ribose modifications, inhibiting antiviral PARP activity.

Conclusions:

  • ADP-ribosylation is an underexplored mechanism in antiviral immunity.
  • Viral macrodomains counteract host antiviral PARP activity.
  • Further research is needed to understand these interactions for therapeutic development.

Related Concept Videos

Leaky Scanning02:28

Leaky Scanning

During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R...
5.3K
Conjugated Proteins02:50

Conjugated Proteins

Simple proteins and protein complexes contain only amino acids. In contrast, many other proteins, called conjugated proteins, covalently bond with non-protein moieties.
Nucleoproteins are protein complexes that contain nucleic acids, categorized as deoxyribonucleoproteins (DNPs) or ribonucleoproteins (RNPs) respectively. The nucleosome is a typical example of a DNP where nuclear DNA is associated with histone proteins. The major antigen for the Covid-19 virus SARS-CoV is an RNP that is critical...
21.7K
Directing Proteins to the Rough Endoplasmic Reticulum01:34

Directing Proteins to the Rough Endoplasmic Reticulum

The organelle-specific signaling sequences direct proteins synthesized in the cytosol to their final destination like ER, mitochondria, peroxisomes, etc. Some of the proteins directed to ER are then trafficked via vesicles to other organelles within the cell or the extracellular environment through the Golgi complex. For example, the rough ER synthesizes soluble proteins for transportation to the lysosomes or secretion out of the cell. It can also synthesize transmembrane proteins that can...
13.6K
RNA Polymerase II Accessory Proteins02:36

RNA Polymerase II Accessory Proteins

3.4K
RNA Polymerase II Accessory Proteins02:36

RNA Polymerase II Accessory Proteins

Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
9.9K
RNA Editing02:23

RNA Editing

RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
9.3K