Related Experiment Video
Updated: Oct 25, 2025

Imaging Subcellular Structures in the Living Zebrafish Embryo
Published on: April 2, 2016
NIR-emitting styryl dyes with large Stokes' shifts for imaging application: From cellular plasma membrane,
Dipendra Dahal1, Krishna R Ojha1, Sabita Pokhrel1
1Department of Chemistry, The University of Akron, Akron, OH 44325, USA.
Abstract:
Near-infrared (NIR) emitting probes with very large Stokes' shifts play a crucial role in bioimaging applications, as the optical signals in this region exhibit high signal to background ratio and allow deeper tissue penetration. Herein we illustrate NIR-emitting probe 2 with very large Stokes' shifts (Δλ ≈ 260 - 272 nm) by integrating the excited-state intramolecular proton transfer (ESIPT) unit 2-(2'-hydroxyphenyl)benzoxazole (HBO) into a pyridinium derived cyanine. The ESIPT not only enhances the Stokes' shifts but also improves the quantum efficiency of the probe 2 (фfl = 0.27 - 0.40 in DCM). The application of 2 in live cells imaging reveals that compound 2 stains mitochondria in eukaryotic cells, normal human lungs fibroblast (NHLF), Zebrafish's neuromast hair cells, and support cells, and inner plasma membrane in prokaryotic cells, Escherichia coli (E. coli).

