Highly Dynamic Polynuclear Metal Cluster Revealed in a Single Metallothionein Molecule
Guodong Yuan1, Felipe Curtolo2, Yibing Deng1
1State Key Laboratory of Coordination Chemistry, Chemistry and Biomedicine Innovation Center (ChemBIC), School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, Jiangsu 210023, China.
Research (Washington, D.C.)
|August 9, 2021
Summary
Human metallothionein (MT) protein dynamics revealed. Single-molecule and simulation methods show MT
Area of Science:
- Biochemistry
- Structural Biology
- Biophysics
Background:
- Human metallothionein (MT) is a crucial protein for metal homeostasis and detoxification.
- MT features two domains with polynuclear metal clusters and a hexatomic ring structure.
- The intrinsically disordered apoprotein and dynamic metal-thiolate bonds complicate structural analysis.
Purpose of the Study:
- To investigate the metal cluster rupture mechanism and chemical stability in a single metallothionein molecule.
- To understand the dynamic structural behavior of the Zn4S11 cluster in the α domain during unfolding.
Main Methods:
- Combined single-molecule approaches with multiscale molecular simulations.
- Focused on the Zn4S11 cluster in the α domain of human metallothionein.
- Analyzed unfolding pathways and metal-thiolate bond dynamics.
Main Results:
- Observed unusual multiple unfolding pathways and intermediates with varying metal-thiolate bond rupture.
- Identified that unfolding proceeds through a distribution of protein conformational substates.
- Simulations revealed metal cluster rearrangement, with metal-thiolate bonds forming and breaking independently of backbone changes.
Conclusions:
- Human metallothionein exhibits a highly dynamic polynuclear metal cluster with multiple conformational states.
- This dynamic nature contributes to MT's metal-binding promiscuity and diverse cellular functions.
- The findings challenge traditional ensemble measurements by highlighting single-molecule dynamics.
Related Concept Videos
Metal-Ligand Bonds
22.5K
The hemoglobin in the blood, the chlorophyll in green plants, vitamin B-12, and the catalyst used in the manufacture of polyethylene all contain coordination compounds. Ions of the metals, especially the transition metals, are likely to form complexes.
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
22.5K
Complexation Equilibria: Factors Influencing Stability of Complexes
563
In complexation reactions, metal cations are the electron pair acceptors, and the ligands are the electron pair donors. The stability of the metal complexes depends primarily on the complexing ability of the central metal ion and the nature of the ligands. Generally, the complexing ability of the metal ion depends on the size and charge of the ion. As the metal ion size increases, the stability of the metal complexes decreases, provided that the valency of the metal ion and the ligands remain...
563
Complexation Equilibria: The Chelate Effect
765
In complexation reactions, metal atoms or cations interact with ligands to form donor-acceptor adducts called metal complexes. Ligands that bind through one donor site are monodentate, ligands with two donor sites are bidentate, and those with more than two donor sites are polydentate ligands. For example, ethylene diamine is a bidentate ligand that binds through two nitrogen donor atoms, forming a five-membered ring. EDTA is a polydentate ligand that binds through four oxygen and two nitrogen...
765
Valence Bond Theory
9.9K
Coordination compounds and complexes exhibit different colors, geometries, and magnetic behavior, depending on the metal atom/ion and ligands from which they are composed. In an attempt to explain the bonding and structure of coordination complexes, Linus Pauling proposed the valence bond theory, or VBT, using the concepts of hybridization and the overlapping of the atomic orbitals. According to VBT, the central metal atom or ion (Lewis acid) hybridizes to provide empty orbitals of suitable...
9.9K
Formation of Complex Ions
24.6K
A type of Lewis acid-base chemistry involves the formation of a complex ion (or a coordination complex) comprising a central atom, typically a transition metal cation, surrounded by ions or molecules called ligands. These ligands can be neutral molecules like H2O or NH3, or ions such as CN− or OH−. Often, the ligands act as Lewis bases, donating a pair of electrons to the central atom. These types of Lewis acid-base reactions are examples of a broad subdiscipline called coordination...
24.6K
Crystal Field Theory - Octahedral Complexes
28.5K
Crystal Field Theory
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
28.5K


