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Updated: Oct 25, 2025

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Published on: December 1, 2023
Pigment analysis based on a line-scanning fluorescence hyperspectral imaging microscope combined with multivariate
Lijin Lian1,2, Xuejuan Hu1,2,3, Zhenhong Huang1,2,3
1Key Laboratory of Advanced Optical Precision Manufacturing Technology of Guangdong Provincial Higher Education Institute, Shenzhen Technology University, Shenzhen, Guangdong, China.
This study introduces an optimized multivariate curve resolution (MCR) method for hyperspectral imaging (HSI) to accurately detect harmful algae. The system efficiently maps microalgae pigment distribution and concentration, improving water quality monitoring.
Area of Science:
- Environmental Science
- Analytical Chemistry
- Microscopy
Background:
- Harmful algae blooms pose significant threats to water quality.
- Accurate and rapid detection of harmful algae is crucial for environmental management.
- Previous methods struggled with overlapping spectral signatures of algae pigments.
Purpose of the Study:
- To develop an optimized multivariate curve resolution (MCR) method for analyzing hyperspectral fluorescence imaging (HSI) data.
- To improve the accuracy of pigment analysis in microalgae detection.
- To enable precise mapping of microalgae pigment distribution and concentration.
Main Methods:
- Utilized hyperspectral fluorescence imaging microscopy to capture spectral signatures.
- Applied an optimized multivariate curve resolution (MCR) technique for spectral unmixing.
- Reconstructed images to visualize pigment location and concentration.
Main Results:
- The optimized MCR method successfully resolved overlapping spectra.
- Generated images accurately depicted cyanobacterial pigment distribution.
- Quantified relative pigment content, aiding in harmful algae identification.
Conclusions:
- Hyperspectral imaging (HSI) combined with MCR provides a powerful tool for analyzing microalgae.
- This approach efficiently integrates spectral and spatial information for accurate harmful algae detection.
- The developed system offers a rapid and cost-effective solution for water quality monitoring.
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