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Updated: Oct 25, 2025

Establishment and Culture of Patient-Derived Breast Organoids
Published on: February 17, 2023
Ultrastructural analysis of breast cancer patient-derived organoids
Lorena Signati1, Raffaele Allevi1, Francesca Piccotti2
1Dipartimento di Scienze Biomediche e cliniche "L. Sacco", Università di Milano, 20157, Milan, Italy.
Background:
Breast cancer Patient Derived Organoids (PDO) have been demonstrated to be a reliable model to study cancer that promised to replace and reduce the use of animals in pre-clinical research. They displayed concordance with the tissue of origin, resuming its heterogenicity and representing a good platform to develop approaches of personalized medicines. Although obtain PDOs from mammary tumour, was a very challenging process, several ongoing studies evaluated them as a platform to study efficacy, sensitivity and specificity of new drugs and exploited them in personalized medicine. Despite tissue organization represented a crucial point to evaluate in a 3-dimensional model, since it could influence drug penetration, morphology of breast cancer PDOs has not been analysed yet. Here, we proposed a complete ultrastructural analysis of breast PDOs obtained from tumour and healthy tissues to evaluate how typical structures observed in mammary gland were resumed in this model.
Methods:
81 samples of mammary tissue (healthy or tumour) resulting from surgical resections have been processed to obtain PDO. The resulting PDOs embedded in matrigel drop have been processed for transmission electron microscopy and analysed. A comparison between ones from healthy and ones from cancerous tissue has been performed and PDOs derived from tumour tissue have been stratified according to their histological and molecular subtype.
Result:
The morphological analysis performed on 81 PDO revealed an organized structure rich in Golgi, secretion granules and mitochondria, which was typical of cells with a strong secretory activity and active metabolism. The presence of desmosomes, inter and intracellular lumens and of microvilli and interdigitations signified a precise tissue-organization. Each PDO has been classified based on whether or not it possessed (i) peripheral ridges in mitochondria, (ii) intracellular lumens, (iii) intercellular lumens, (iv) micro-vesicles, (v) open desmosomes, (vi) cell debris, (vii) polylobed nuclei, (viii) lysosomes and (ix) secretion granules, in order to identify features coupled with the cancerous state or with a specific histological or molecular subtype.
Conclusion:
Here we have demonstrated the suitability of breast cancer PDO as 3-dimensional model of mammary tissue. Besides, some structural features characterizing cancerous PDO have been observed, identifying the presence of distinctive traits.
Insights
Breast cancer patient-derived organoids (PDO) accurately model mammary tissue ultrastructure. This study identified specific structural features distinguishing cancerous PDOs, advancing personalized medicine and pre-clinical research.
Area of Science:
- Oncology
- Cell Biology
- Biomedical Research
Background:
- Patient-derived organoids (PDOs) are promising pre-clinical models for breast cancer research, mimicking tumor heterogeneity and enabling personalized medicine approaches.
- While PDOs are used to study drug efficacy, their ultrastructural morphology, crucial for understanding drug penetration, remains under-analyzed.
- This study focuses on the ultrastructural analysis of breast cancer PDOs to assess their fidelity as a model of mammary gland tissue.
Purpose of the Study:
- To perform a comprehensive ultrastructural analysis of breast cancer patient-derived organoids (PDOs).
- To evaluate how well PDOs recapitulate the typical structures of normal mammary gland tissue.
- To identify specific ultrastructural features associated with cancerous breast tissue and its subtypes.
Main Methods:
- Processed 81 mammary tissue samples (healthy and tumor) to generate PDOs.
- Utilized transmission electron microscopy for detailed ultrastructural analysis of embedded PDOs.
- Compared PDOs from healthy and cancerous tissues, stratifying tumor-derived PDOs by histological and molecular subtype.
Main Results:
- Breast cancer PDOs exhibit organized structures with features of high secretory activity and active metabolism, including abundant Golgi, secretion granules, and mitochondria.
- Presence of desmosomes, inter/intracellular lumens, microvilli, and interdigitations indicates precise tissue organization within PDOs.
- Classified PDOs based on specific ultrastructural markers (e.g., mitochondrial ridges, lumens, desmosomes, granules) to correlate with cancerous state and subtypes.
Conclusions:
- Breast cancer PDOs are suitable 3D models that accurately represent mammary tissue ultrastructure.
- Distinctive ultrastructural features have been identified in cancerous PDOs, offering potential biomarkers.
- This research validates PDOs for pre-clinical breast cancer studies and personalized medicine development.
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