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Updated: Oct 25, 2025

A Method for Screening and Validation of Resistant Mutations Against Kinase Inhibitors
Published on: December 7, 2014
Acquired JAK2 mutations confer resistance to JAK inhibitors in cell models of acute lymphoblastic leukemia
Charlotte E J Downes1,2, Barbara J McClure1,3, John B Bruning4
1Cancer Program, Precision Medicine Theme, South Australian Health & Medical Research Institute (SAHMRI), Adelaide, SA, Australia.
Abstract:
Ruxolitinib (rux) Phase II clinical trials are underway for the treatment of high-risk JAK2-rearranged (JAK2r) B-cell acute lymphoblastic leukemia (B-ALL). Treatment resistance to targeted inhibitors in other settings is common; elucidating potential mechanisms of rux resistance in JAK2r B-ALL will enable development of therapeutic strategies to overcome or avert resistance. We generated a murine pro-B cell model of ATF7IP-JAK2 with acquired resistance to multiple type-I JAK inhibitors. Resistance was associated with mutations within the JAK2 ATP/rux binding site, including a JAK2 p.G993A mutation. Using in vitro models of JAK2r B-ALL, JAK2 p.G993A conferred resistance to six type-I JAK inhibitors and the type-II JAK inhibitor, CHZ-868. Using computational modeling, we postulate that JAK2 p.G993A enabled JAK2 activation in the presence of drug binding through a unique resistance mechanism that modulates the mobility of the conserved JAK2 activation loop. This study highlights the importance of monitoring mutation emergence and may inform future drug design and the development of therapeutic strategies for this high-risk patient cohort.
Insights
Acquired mutations in JAK2, like JAK2 p.G993A, can cause resistance to ruxolitinib (rux) in B-cell acute lymphoblastic leukemia (B-ALL). Understanding these mutations is crucial for developing new therapies for JAK2-rearranged B-ALL.
Area of Science:
- Hematology
- Oncology
- Molecular Biology
Background:
- Ruxolitinib (rux) is being investigated in Phase II trials for high-risk JAK2-rearranged (JAK2r) B-cell acute lymphoblastic leukemia (B-ALL).
- Therapeutic resistance to targeted inhibitors is a significant challenge in cancer treatment.
Purpose of the Study:
- To investigate mechanisms of acquired resistance to JAK inhibitors in JAK2r B-ALL.
- To understand how specific mutations in JAK2 affect drug sensitivity.
Main Methods:
- Generation of a murine pro-B cell model with acquired resistance to JAK inhibitors.
- Identification of mutations in the JAK2 ATP/rux binding site, including JAK2 p.G993A.
- In vitro testing of JAK inhibitor efficacy against JAK2r B-ALL with specific mutations.
- Computational modeling to elucidate resistance mechanisms.
Main Results:
- Acquired resistance to multiple JAK inhibitors was associated with mutations in the JAK2 ATP/rux binding site.
- The JAK2 p.G993A mutation conferred resistance to six type-I JAK inhibitors and one type-II JAK inhibitor (CHZ-868).
- Computational modeling suggested JAK2 p.G993A facilitates drug-resistant JAK2 activation by altering the activation loop mobility.
Conclusions:
- Emergence of JAK2 mutations, such as p.G993A, is a key mechanism of resistance to JAK inhibitors in JAK2r B-ALL.
- Monitoring for mutation emergence is critical for effective treatment strategies.
- Findings may guide future drug design and therapeutic development for high-risk B-ALL patients.
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