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Published on: March 6, 2018
Particle Swarm Optimized Gaussian Process Classifier for Treatment Discontinuation Prediction in Multicohort
Abstract:
Prostate cancer is the second leading cancer in men, according to the WHO world cancer report. Its prevention and treatment demand proper attention. Despite numerous attempts for disease prevention, prostate tumours can still become metastatic by blood circulation to other organs. Several treatments have been adopted. However, findings show that the docetaxel treatment induces adverse reactions in patients. Particle Swarm Optimized Gaussian Process Classifier (PSO-GPC) is proposed to determine when to discontinue treatment. Based on three cohorts of prostate cancer patients, we propose and compare several classifiers for the best performance in determining treatment discontinuation. Given the data skewness and class imbalance, the models are evaluated based on both the area under receiver operating characteristics curve (AUC) and area under precision recall curve (AUPRC). With the AUCs ranging between 0.6717-0.8499, and AUPRCs ranging between 0.1392-0.5423, PSO-GPC performs better than the state-of-the-art. We have carried out statistical analysis for ranking methods and analyzed independent cohort data with PSO-GPC, demonstrating its unbiased performance. A proper determination of treatment discontinuation in metastatic castration-resistant prostate cancer patients will reduce the mortality rate in cancer patients.
Insights
A new classifier, Particle Swarm Optimized Gaussian Process Classifier (PSO-GPC), helps determine when to stop prostate cancer treatment. This method aims to reduce adverse reactions and improve outcomes for patients with metastatic castration-resistant prostate cancer.
Area of Science:
- Oncology
- Machine Learning
- Biostatistics
Background:
- Prostate cancer is a significant global health concern, particularly in men.
- Metastasis remains a challenge in prostate cancer treatment.
- Docetaxel treatment, while common, can cause adverse reactions.
Purpose of the Study:
- To develop and evaluate a machine learning model for optimal discontinuation of prostate cancer treatment.
- To compare the performance of various classifiers in identifying appropriate treatment cessation points.
- To reduce adverse effects and mortality in metastatic castration-resistant prostate cancer patients.
Main Methods:
- Implementation and comparison of multiple classification models, including Particle Swarm Optimized Gaussian Process Classifier (PSO-GPC).
- Utilizing three independent cohorts of prostate cancer patient data.
- Evaluating model performance using Area Under the Receiver Operating Characteristics Curve (AUC) and Area Under the Precision-Recall Curve (AUPRC) due to data skewness and class imbalance.
Main Results:
- PSO-GPC demonstrated superior performance compared to state-of-the-art methods.
- Achieved AUCs ranging from 0.6717 to 0.8499 and AUPRCs from 0.1392 to 0.5423.
- Statistical analysis confirmed the unbiased and robust performance of PSO-GPC across independent datasets.
Conclusions:
- The proposed PSO-GPC model offers a promising approach for personalized treatment decisions in prostate cancer.
- Optimizing treatment discontinuation can mitigate adverse reactions and potentially lower mortality rates.
- This study highlights the potential of advanced machine learning in managing complex oncological treatments.
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