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Updated: Oct 24, 2025

Establishment of a Primary Culture of Patient-derived Soft Tissue Sarcoma
Published on: April 11, 2018
Expanding the Molecular Genetic Spectrum of Bone and Soft Tissue Fibrosarcomas: An Institutional Experience
Bruce D Leckey1, Ivy John1, Abigail Wald1
16595University of Pittsburgh Medical Center, Pittsburgh, PA, USA.
Abstract:
Introduction. Fibrosarcomas, once comprising the majority of unclassifiable spindle-cell sarcomas, are now regarded as a diagnosis of exclusion. Objectives. Prompted by an index report of neurotrophic receptor tyrosine kinase (NTRK)3 fusion in fibrosarcomas by Yamazaki et al bone/soft tissue tumors diagnosed as fibrosarcoma at our institution were evaluated in an attempt to expand the genetic spectrum of fibrosarcomas and identify therapeutically targetable cases. Methods. Institutional archives were searched for cases diagnosed as "fibrosarcoma" involving bone/soft tissue from 2000 to present. Twenty-one cases meeting inclusion criteria were identified, 10 of which had formalin-fixed paraffin-embedded tissue available for molecular testing. One case, at the submitting clinician's request, underwent outside deoxyribonucleic acid/ribonucleic acid (DNA/RNA) sequencing while the 9 remaining cases underwent in-house next-generation sequencing RNA fusion analysis. Results. At the time of diagnosis the mean age was 54.5 (range 14-88) with a male to female ratio of 1.5:1. Locations included soft tissue of the lower extremity (3), trunk (2), pelvis (2), head (1), upper extremity (1), and bone (1). Of the 10 cases, 1 demonstrated an FNDC3B-PIK3CA gene fusion and 1 demonstrated a BRAF (p.G469A) mutation and CDKN2A/B loss. Conclusion. In conclusion, our study demonstrated gene fusions in 1 (10%) of 10 fibrosarcomas diagnosed at our institution in the past 20 years, including FNDC3B-PIK3CA gene fusion. Additionally, 1 case harbored BRAF (p.G469A) mutation and CDKN2A/B loss with no evidence of gene fusion. NTRK rearrangements were not detected. The significance of these molecular aberrations is presently unclear and future studies are needed to establish whether these findings carry any clinicopathologic significance.
Insights
This study investigated fibrosarcoma genetic alterations, identifying an FNDC3B-PIK3CA gene fusion in one case. Further research is needed to understand the clinical significance of these fibrosarcoma molecular findings.
Area of Science:
- Oncology
- Genetics
- Pathology
Background:
- Fibrosarcomas were historically the most common unclassifiable spindle-cell sarcomas but are now a diagnosis of exclusion.
- Recent identification of neurotrophic receptor tyrosine kinase (NTRK)3 fusions in fibrosarcomas prompted further investigation into their genetic landscape.
Purpose of the Study:
- To expand the known genetic spectrum of fibrosarcomas.
- To identify potentially targetable molecular alterations in fibrosarcoma cases.
- To evaluate bone and soft tissue tumors diagnosed as fibrosarcoma at the institution.
Main Methods:
- Retrospective review of institutional archives for fibrosarcoma cases (bone/soft tissue) from 2000 to present.
- Molecular testing, including next-generation sequencing RNA fusion analysis, on available formalin-fixed paraffin-embedded tissues.
- Analysis of 10 cases with sufficient tissue for molecular evaluation.
Main Results:
- One case (10%) exhibited an FNDC3B-PIK3CA gene fusion.
- Another case showed a BRAF (p.G469A) mutation with CDKN2A/B loss, but no gene fusion.
- No NTRK rearrangements were detected in the analyzed cases.
Conclusions:
- The study identified specific gene fusions and mutations in a small cohort of fibrosarcoma cases.
- The FNDC3B-PIK3CA fusion represents a novel finding in fibrosarcoma.
- The clinical significance of the identified molecular aberrations in fibrosarcoma requires further investigation.

