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Retroviruses02:33

Retroviruses

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Retroviruses and retrotransposons both insert copies of their genetic elements into the genome of the host cell. Thus, the viral genes are passed on when the host genome is replicated or translated. A typical retroviral DNA sequence contains 3-4 genes that encode the different proteins required for its structural assembly and function as a molecular parasite. This DNA is transcribed into a single mRNA, which is very similar in structure to conventional mRNAs, i.e., it is capped at the 5’...
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Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
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Retroviruses have a single-stranded RNA genome that undergoes a special form of replication. Once the retrovirus has entered the host cell, an enzyme called reverse transcriptase synthesizes double-stranded DNA from the retroviral RNA genome. This DNA copy of the genome is then integrated into the host’s genome inside the nucleus via an enzyme called integrase. Consequently, the retroviral genome is transcribed into RNA whenever the host’s genome is transcribed, allowing the...
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Enzyme-Linked Immunosorbent Assay01:33

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In 1971, Peter Perlman and Eva Engvall developed an Enzyme-linked immunosorbent assay (ELISA or EIA). ELISA differs from western blot in that the assays are conducted in microtiter plates or in vivo rather than on an absorbent membrane.
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Related Experiment Video

Updated: Oct 24, 2025

Alternative In Vitro Methods for the Determination of Viral Capsid Structural Integrity
12:57

Alternative In Vitro Methods for the Determination of Viral Capsid Structural Integrity

Published on: November 16, 2017

8.4K

Retroviral Capsid Core Stability Assay.

Tyler Milston Renner1, Kasandra Bélanger1, Marc-André Langlois1

  • 1Department of Biochemistry, Microbiology & Immunology, University of Ottawa, Ottawa, Canada.

Bio-Protocol
|August 16, 2021
PubMed
Summary

Assessing retroviral capsid core stability is vital for understanding viral fitness. A new detergent-based method offers a simpler, faster alternative to existing techniques for evaluating capsid core stability in murine leukemia virus.

Keywords:
Capsid core stability assayEnveloped virusFate of capsid assayGlycosylated GagHIVMLVRetrovirusTRIM5αgPr80

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Area of Science:

  • Virology
  • Molecular Biology
  • Structural Biology

Background:

  • Retroviral capsid core stability is crucial for productive infection and viral replicative fitness.
  • Compromised core stability can trigger innate antiviral responses and impair proviral DNA integration.
  • Existing methods for assessing capsid core stability are often time-consuming and labor-intensive.

Purpose of the Study:

  • To compare the relative stability of murine leukemia virus capsid cores.
  • To evaluate a novel in vitro detergent-based approach against a standard assay.
  • To determine a simpler and faster method for assessing capsid core stability.

Main Methods:

  • Utilized an in vitro detergent-based assay combined with ultracentrifugation.
  • Compared the results with the established fate of capsid assay.
  • Assessed the relative stability of murine leukemia virus capsid cores and mutants.

Main Results:

  • Both the detergent-based method and the fate of capsid assay yielded similar conclusions regarding relative core stability.
  • The detergent-based approach proved to be significantly simpler and faster.
  • This method effectively differentiated between viral mutants with varying capsid core stability.

Conclusions:

  • The in vitro detergent-based ultracentrifugation method is a valid and efficient alternative for assessing retroviral capsid core stability.
  • This simpler, faster technique facilitates the study of viral mutants and their replicative fitness.
  • Optimized methods for assessing capsid core stability are essential for understanding retroviral infection dynamics.