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Updated: Oct 23, 2025

Differentiation of a Human Neural Stem Cell Line on Three Dimensional Cultures, Analysis of MicroRNA and Putative Target Genes
Published on: April 12, 2015
Age-associated changes in microRNAs affect the differentiation potential of human mesenchymal stem cells: Novel role
Nada H Eisa1, Periyasamy T Sudharsan2, Sergio Mas Herrero3
1Department of Pathology and Laboratory Medicine, Medical University of South Carolina, Charleston, SC 29403, United States of America; Ralph H. Johnson Veterans Affairs Medical Center, Charleston, SC 29403, United States of America; Department of Biochemistry, Faculty of Pharmacy, Mansoura University, Mansoura 35516, Egypt.
Abstract:
Age-associated osteoporosis is widely accepted as involving the disruption of osteogenic stem cell populations and their functioning. Maintenance of the local bone marrow (BM) microenvironment is critical for regulating proliferation and differentiation of the multipotent BM mesenchymal stromal/stem cell (BMSC) population with age. The potential role of microRNAs (miRNAs) in modulating BMSCs and the BM microenvironment has recently gained attention. However, miRNAs expressed in rapidly isolated BMSCs that are naïve to the non-physiologic standard tissue culture conditions and reflect a more accurate in vivo profile have not yet been reported. Here we directly isolated CD271 positive (+) BMSCs within hours from human surgical BM aspirates without culturing and performed microarray analysis to identify the age-associated changes in BMSC miRNA expression. One hundred and two miRNAs showed differential expression with aging. Target prediction and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses revealed that the up-regulated miRNAs targeting genes in bone development pathways were considerably enriched. Among the differentially up-regulated miRNAs the novel passenger strand miR-29b-1-5p was abundantly expressed as a mature functional miRNA with aging. This suggests a critical arm-switching mechanism regulates the expression of the miR-29b-1-5p/3p pair shifting the normally degraded arm, miR-29b-1-5p, to be the dominantly expressed miRNA of the pair in aging. The normal guide strand miR-29b-1-3p is known to act as a pro-osteogenic miRNA. On the other hand, overexpression of the passenger strand miR-29b-1-5p in culture-expanded CD271+ BMSCs significantly down-regulated the expression of stromal cell-derived factor 1 (CXCL12)/ C-X-C chemokine receptor type 4 (SDF-1(CXCL12)/CXCR4) axis and other osteogenic genes including bone morphogenetic protein-2 (BMP-2) and runt-related transcription factor 2 (RUNX2). In contrast, blocking of miR-29b-1-5p function using an antagomir inhibitor up-regulated expression of BMP-2 and RUNX2 genes. Functional assays confirmed that miR-29b-1-5p negatively regulates BMSC osteogenesis in vitro. These novel findings provide evidence of a pathogenic anti-osteogenic role for miR-29b-1-5p and other miRNAs in age-related defects in osteogenesis and bone regeneration.
Insights
Aging disrupts bone marrow mesenchymal stem cells (BMSCs) and their microenvironment. A novel microRNA, miR-29b-1-5p, emerges as a key player, inhibiting osteogenesis and contributing to age-related bone loss.
Area of Science:
- Stem cell biology
- Molecular biology
- Gerontology
Background:
- Age-associated osteoporosis involves bone marrow (BM) microenvironment disruption and impaired mesenchymal stromal/stem cell (BMSC) function.
- MicroRNAs (miRNAs) are increasingly recognized for their role in modulating BMSCs and the BM microenvironment.
- Direct analysis of miRNAs in freshly isolated BMSCs offers a more accurate in vivo profile compared to cultured cells.
Purpose of the Study:
- To identify age-associated changes in miRNA expression in human CD271+ BMSCs isolated directly from bone marrow aspirates.
- To investigate the role of specific differentially expressed miRNAs, particularly miR-29b-1-5p, in regulating BMSC osteogenesis and bone regeneration.
Main Methods:
- Microarray analysis of miRNAs from freshly isolated human CD271+ BMSCs (BM aspirates).
- Bioinformatic target prediction and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis.
- In vitro functional assays using antagomir inhibitors to assess miR-29b-1-5p's effect on osteogenic gene expression and BMSC osteogenesis.
Main Results:
- One hundred and two miRNAs showed differential expression with aging.
- Up-regulated miRNAs predominantly targeted bone development pathways.
- The passenger strand miRNA, miR-29b-1-5p, was significantly up-regulated with age and demonstrated an anti-osteogenic function by down-regulating key osteogenic genes (SDF-1, BMP-2, RUNX2).
Conclusions:
- Aging leads to an 'arm-switching' in the miR-29b-1 microRNA precursor, favoring the pathogenic miR-29b-1-5p over the pro-osteogenic miR-29b-1-3p.
- miR-29b-1-5p plays a critical pathogenic role in age-related bone loss by inhibiting BMSC osteogenesis.
- These findings highlight novel miRNA targets for therapeutic intervention in osteoporosis and bone regeneration.
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