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Multiplexed Isothermal Amplification Based Diagnostic Platform to Detect Zika, Chikungunya, and Dengue 1
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Loop-Mediated Isothermal Amplification (LAMP): The Better Sibling of PCR?
Marianna Soroka1, Barbara Wasowicz1, Anna Rymaszewska1
1Department of Genetics and Genomics, Institute of Biology, University of Szczecin, 3c Felczaka St., 71-412 Szczecin, Poland.
Cells
|August 27, 2021
Summary
Loop-mediated isothermal amplification (LAMP) is a rapid DNA amplification technique developed in 1998. This method offers high specificity and efficiency, producing billions of DNA copies in under an hour at a stable temperature.
Area of Science:
- Molecular Biology
- Biotechnology
- Diagnostics
Background:
- Polymerase Chain Reaction (PCR) was a popular DNA amplification technique before 1998.
- Eiken Chemical Co., Ltd. developed Loop-mediated Isothermal Amplification (LAMP) in 1998.
- LAMP offers advantages over traditional methods like PCR.
Purpose of the Study:
- To highlight the usefulness and effectiveness of LAMP.
- To compare LAMP with PCR, emphasizing LAMP's superiority.
- To present Reverse Transcription LAMP (RT-LAMP) as a rapid diagnostic tool for SARS-CoV-2.
Main Methods:
- LAMP utilizes 2-3 pairs of primers (internal, external, loop) recognizing up to 8 specific DNA/RNA locations.
- Employs Bst DNA polymerase with high strand displacement activity, eliminating the DNA denaturation step.
- Conducts amplification at a stable temperature (e.g., dry block heater, incubator).
Main Results:
- Achieves up to 10^9 copies of amplified DNA in less than an hour.
- Demonstrates high specificity due to primer design targeting multiple locations.
- Enables rapid detection of amplification products, sometimes by naked eye observation.
Conclusions:
- LAMP is a highly efficient and specific DNA amplification method.
- Its isothermal nature and rapid detection offer significant advantages over PCR.
- RT-LAMP shows promise as a fast and effective diagnostic tool, particularly for viral detection like SARS-CoV-2.
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