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Updated: Oct 22, 2025

Applying Advanced In Vitro Culturing Technology to Study the Human Gut Microbiota
Published on: February 15, 2019
Does Day-to-Day Variability in Stool Consistency Link to the Fecal Microbiota Composition?
Lisa Vork1, John Penders2, Jonna Jalanka3
1Division of Gastroenterology-Hepatology, Department of Internal Medicine, NUTRIM School of Nutrition and Translational Research in Metabolism, Maastricht University Medical Center+, Maastricht, Netherlands.
Stool consistency is linked to fecal microbiota composition. While day-to-day stool changes don't impact microbiota within a week, consistency remains crucial for gut microbiota research.
Area of Science:
- Gastroenterology
- Microbiology
- Human Gut Microbiome Research
Background:
- Fecal microbial composition is linked to stool consistency.
- Variability in stool consistency over time is common in individuals with and without gastrointestinal disorders.
- The impact of day-to-day stool consistency fluctuations on fecal microbiota requires investigation.
Purpose of the Study:
- To evaluate the within-subject day-to-day variability in stool consistency.
- To assess the association between stool consistency and fecal microbiota composition.
- To investigate these associations in individuals with irritable bowel syndrome (IBS) and healthy controls.
Main Methods:
- 12 IBS patients and 12 healthy subjects provided daily fecal samples over seven days.
- Stool consistency was assessed using the Bristol Stool Scale (BSS) and fecal dry weight.
- Fecal microbiota was analyzed using 16S rRNA gene sequencing to determine microbial richness and community structure.
Main Results:
- Significant associations were found between stool consistency and microbial richness (alpha diversity).
- Significant associations were observed between stool consistency and microbial community structure (beta diversity).
- No significant time effect was detected for within-subject day-to-day variations in stool consistency or its impact on microbiota.
Conclusions:
- Stool consistency is associated with fecal microbiota, but short-term (seven-day) fluctuations do not affect it.
- This study underscores the importance of considering stool consistency in gut microbiota research.
- Single fecal sample collection remains valid for representing an individual's microbiota at a specific time point.
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