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Weakly supervised underwater fish segmentation using affinity LCFCN.

Issam H Laradji1,2, Alzayat Saleh3, Pau Rodriguez4

  • 1Element AI, Montreal, Canada. issam.laradji@gmail.com.

Scientific Reports
|August 31, 2021
PubMed
Summary
This summary is machine-generated.

We developed Affinity-LCFCN (A-LCFCN), a novel fish segmentation model. It uses point-level supervision for faster, efficient training, significantly reducing annotation time for fish body measurements.

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Area of Science:

  • Computer Vision
  • Marine Biology
  • Aquaculture Technology

Background:

  • Accurate fish body measurements are crucial for marine and aquaculture productivity.
  • Current manual and fully-supervised methods for fish measurement are time-consuming and labor-intensive.
  • Per-pixel segmentation labels require up to 2 minutes per fish, hindering scalability.

Purpose of the Study:

  • To develop an efficient fish segmentation model using point-level supervision.
  • To reduce the time and effort required for annotating fish images for measurement.
  • To improve the accuracy and efficiency of automated fish body measurement estimation.

Main Methods:

  • Proposed Affinity-LCFCN (A-LCFCN), a fully convolutional neural network model.
  • Employed point-level supervision, requiring only a single click per fish (average 1 second annotation time).
  • Integrated per-pixel scores and affinity matrix outputs, refined using a random walk and trained with localization-based counting fully convolutional neural network (LCFCN) loss.

Main Results:

  • A-LCFCN demonstrated superior performance compared to fully-supervised models under fixed annotation budgets.
  • The model achieved better segmentation results than the standard LCFCN and other baseline methods.
  • Point-level supervision significantly reduced annotation time, making fish measurement more efficient.

Conclusions:

  • Affinity-LCFCN offers an efficient and effective solution for fish segmentation using minimal annotation effort.
  • The proposed method holds significant potential for enhancing productivity in marine and aquaculture applications.
  • Point-level supervision is a viable and advantageous alternative to traditional per-pixel labeling for fish measurement tasks.