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Published on: May 8, 2020
Characterization of Bdellovibrio bacteriovorus bacteriophage MAC-1
R C Roberts1, M A Keefer, R S Ranu
1Department of Microbiology, Colorado State University, Fort Collins 80523.
Abstract:
The bacteriophage MAC-1, which specifically infects Bdellovibrio bacteriovorus, was plaque purified and raised to high titre. The phage was purified by NaCl/polyethylene glycol precipitation, followed by two cycles of isopycnic density gradient centrifugation in CsCl. The purified phage exhibited a density of 1.363 g cm-3 and a sedimentation coefficient of 94S. Nucleic acid isolated from purified phage was resistant to hydrolysis under alkaline conditions and to digestion with RNAase, but it was hydrolysed by DNAase, providing evidence that the phage genome is made up of DNA. The lack of hyperchromic effect upon denaturation, hydrolysis of phage DNA by S1 nuclease, characteristic fluorescent staining with acridine orange, and resistance to digestion with a variety of restriction endonucleases are consistent with the DNA being single-stranded. A buoyant density of 1.722 g cm-3 and a sedimentation coefficient of 17.9S were obtained for the phage DNA. The molecular mass of phage DNA was determined as 1.58 MDa by agarose gel electrophoresis with single-stranded DNA as standards. Electron microscopy of the DNA showed that the genome is circular in nature. In addition, using Southern blots, the two replicative forms, RF1 (supercoiled) and RF2 (circular) have been identified and isolated from infected cell extracts.
Insights
The bacteriophage MAC-1, which infects Bdellovibrio bacteriovorus, possesses a single-stranded DNA genome. This circular DNA molecule has a mass of 1.58 MDa and exists in two replicative forms.
Area of Science:
- Microbiology
- Virology
- Molecular Biology
Background:
- Bdellovibrio bacteriovorus is a predatory bacterium that preys on other Gram-negative bacteria.
- Bacteriophages are viruses that infect bacteria and are crucial in microbial ecology and evolution.
Purpose of the Study:
- To characterize the bacteriophage MAC-1, a specific predator of Bdellovibrio bacteriovorus.
- To determine the nature and structure of the bacteriophage MAC-1's genetic material.
Main Methods:
- Phage purification using precipitation and CsCl density gradient centrifugation.
- Nucleic acid analysis including DNase/RNase digestion, S1 nuclease hydrolysis, and acridine orange staining.
- Molecular weight determination via agarose gel electrophoresis and electron microscopy.
- Identification of replicative forms using Southern blot analysis.
Main Results:
- Bacteriophage MAC-1 was purified and characterized with a density of 1.363 g cm-3 and sedimentation coefficient of 94S.
- The phage genome was confirmed to be DNA, exhibiting properties consistent with single-stranded DNA.
- The single-stranded DNA genome is circular, with a molecular mass of 1.58 MDa.
- Two replicative forms, RF1 (supercoiled) and RF2 (circular), were identified in infected cells.
Conclusions:
- Bacteriophage MAC-1 harbors a single-stranded, circular DNA genome.
- The characterization provides insights into the replication and lifecycle of this specific bacteriophage.
- This study contributes to the understanding of phage-host interactions within the Bdellovibrio bacteriovorus system.
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